Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCL13Q99616 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCL13Q99616 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCL13Q99616 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CCL13Q99616 FEM1AP1-201ENST00000431297 1995 ntBASIC16.93■□□□□ 0.3
CCL13Q99616 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCL13Q99616 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCL13Q99616 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCL13Q99616 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CCL13Q99616 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCL13Q99616 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCL13Q99616 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC16.92■□□□□ 0.3
CCL13Q99616 AL157384.1-201ENST00000445995 2473 ntBASIC16.92■□□□□ 0.3
CCL13Q99616 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCL13Q99616 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCL13Q99616 AC073314.1-201ENST00000568729 2216 ntBASIC16.92■□□□□ 0.3
CCL13Q99616 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCL13Q99616 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCL13Q99616 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC16.92■□□□□ 0.3
CCL13Q99616 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CCL13Q99616 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CCL13Q99616 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCL13Q99616 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC16.92■□□□□ 0.3
CCL13Q99616 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC16.92■□□□□ 0.3
CCL13Q99616 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC16.92■□□□□ 0.3
CCL13Q99616 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC16.92■□□□□ 0.3
CCL13Q99616 BET1L-207ENST00000529614 560 ntTSL 5 BASIC16.92■□□□□ 0.3
CCL13Q99616 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC16.92■□□□□ 0.3
CCL13Q99616 AC142086.2-201ENST00000569753 217 ntBASIC16.92■□□□□ 0.3
CCL13Q99616 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC16.92■□□□□ 0.3
CCL13Q99616 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
CCL13Q99616 AC133041.1-202ENST00000642053 222 ntBASIC16.92■□□□□ 0.3
CCL13Q99616 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC16.92■□□□□ 0.3
CCL13Q99616 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCL13Q99616 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CCL13Q99616 NXN-202ENST00000537628 1340 ntTSL 3 BASIC16.92■□□□□ 0.3
CCL13Q99616 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC16.92■□□□□ 0.3
CCL13Q99616 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC16.92■□□□□ 0.3
CCL13Q99616 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC16.92■□□□□ 0.3
CCL13Q99616 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCL13Q99616 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCL13Q99616 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCL13Q99616 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCL13Q99616 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCL13Q99616 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCL13Q99616 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCL13Q99616 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCL13Q99616 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCL13Q99616 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCL13Q99616 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCL13Q99616 AC069152.1-201ENST00000438030 544 ntBASIC16.91■□□□□ 0.3
CCL13Q99616 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC16.91■□□□□ 0.3
CCL13Q99616 AC091874.3-201ENST00000512672 1195 ntBASIC16.91■□□□□ 0.3
CCL13Q99616 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCL13Q99616 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCL13Q99616 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC16.91■□□□□ 0.3
CCL13Q99616 C2orf69P4-201ENST00000565394 541 ntBASIC16.91■□□□□ 0.3
CCL13Q99616 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC16.91■□□□□ 0.3
CCL13Q99616 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCL13Q99616 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC16.91■□□□□ 0.3
CCL13Q99616 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCL13Q99616 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC16.91■□□□□ 0.3
CCL13Q99616 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC16.91■□□□□ 0.3
CCL13Q99616 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCL13Q99616 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC16.91■□□□□ 0.3
CCL13Q99616 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CCL13Q99616 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCL13Q99616 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC16.9■□□□□ 0.3
CCL13Q99616 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCL13Q99616 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCL13Q99616 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC16.9■□□□□ 0.3
CCL13Q99616 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCL13Q99616 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCL13Q99616 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC16.9■□□□□ 0.3
CCL13Q99616 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCL13Q99616 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CCL13Q99616 AC097658.1-201ENST00000475555 843 ntBASIC16.9■□□□□ 0.3
CCL13Q99616 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC16.9■□□□□ 0.3
CCL13Q99616 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC16.9■□□□□ 0.3
CCL13Q99616 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC16.9■□□□□ 0.3
CCL13Q99616 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC16.9■□□□□ 0.3
CCL13Q99616 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCL13Q99616 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCL13Q99616 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC16.9■□□□□ 0.3
CCL13Q99616 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC16.9■□□□□ 0.3
CCL13Q99616 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCL13Q99616 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CCL13Q99616 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CCL13Q99616 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
CCL13Q99616 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.3
CCL13Q99616 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
CCL13Q99616 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CCL13Q99616 AC092667.1-201ENST00000434301 2586 ntBASIC16.89■□□□□ 0.3
CCL13Q99616 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCL13Q99616 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CCL13Q99616 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CCL13Q99616 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC16.89■□□□□ 0.29
CCL13Q99616 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC16.89■□□□□ 0.29
CCL13Q99616 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCL13Q99616 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms