Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 AC243732.1-201ENST00000612648 864 ntBASIC18.14■□□□□ 0.49
PTP4A1Q93096 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTP4A1Q93096 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTP4A1Q93096 AL158211.5-201ENST00000623583 2518 ntBASIC18.14■□□□□ 0.49
PTP4A1Q93096 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTP4A1Q93096 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PTP4A1Q93096 RBM17P2-201ENST00000616397 1405 ntBASIC18.14■□□□□ 0.49
PTP4A1Q93096 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTP4A1Q93096 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTP4A1Q93096 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTP4A1Q93096 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
PTP4A1Q93096 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTP4A1Q93096 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.13■□□□□ 0.49
PTP4A1Q93096 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
PTP4A1Q93096 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTP4A1Q93096 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
PTP4A1Q93096 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.13■□□□□ 0.49
PTP4A1Q93096 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PTP4A1Q93096 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
PTP4A1Q93096 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
PTP4A1Q93096 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.13■□□□□ 0.49
PTP4A1Q93096 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.13■□□□□ 0.49
PTP4A1Q93096 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PTP4A1Q93096 AL691432.2-201ENST00000607222 2038 ntBASIC18.13■□□□□ 0.49
PTP4A1Q93096 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.13■□□□□ 0.49
PTP4A1Q93096 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PTP4A1Q93096 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTP4A1Q93096 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.12■□□□□ 0.49
PTP4A1Q93096 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.12■□□□□ 0.49
PTP4A1Q93096 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTP4A1Q93096 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PTP4A1Q93096 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PTP4A1Q93096 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.12■□□□□ 0.49
PTP4A1Q93096 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.12■□□□□ 0.49
PTP4A1Q93096 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
PTP4A1Q93096 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.12■□□□□ 0.49
PTP4A1Q93096 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTP4A1Q93096 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
PTP4A1Q93096 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
PTP4A1Q93096 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.12■□□□□ 0.49
PTP4A1Q93096 SLC7A5P1-201ENST00000568957 537 ntBASIC18.12■□□□□ 0.49
PTP4A1Q93096 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.12■□□□□ 0.49
PTP4A1Q93096 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.12■□□□□ 0.49
PTP4A1Q93096 AC116562.4-201ENST00000641316 2276 ntBASIC18.12■□□□□ 0.49
PTP4A1Q93096 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTP4A1Q93096 DPP3P2-201ENST00000416030 1696 ntBASIC18.12■□□□□ 0.49
PTP4A1Q93096 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.12■□□□□ 0.49
PTP4A1Q93096 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
PTP4A1Q93096 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTP4A1Q93096 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTP4A1Q93096 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PTP4A1Q93096 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTP4A1Q93096 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PTP4A1Q93096 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PTP4A1Q93096 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTP4A1Q93096 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTP4A1Q93096 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTP4A1Q93096 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PTP4A1Q93096 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PTP4A1Q93096 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTP4A1Q93096 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PTP4A1Q93096 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.11■□□□□ 0.49
PTP4A1Q93096 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.11■□□□□ 0.49
PTP4A1Q93096 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTP4A1Q93096 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTP4A1Q93096 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTP4A1Q93096 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
PTP4A1Q93096 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
PTP4A1Q93096 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
PTP4A1Q93096 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PTP4A1Q93096 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTP4A1Q93096 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
PTP4A1Q93096 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTP4A1Q93096 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTP4A1Q93096 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PTP4A1Q93096 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
PTP4A1Q93096 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PTP4A1Q93096 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTP4A1Q93096 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PTP4A1Q93096 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PTP4A1Q93096 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PTP4A1Q93096 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTP4A1Q93096 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTP4A1Q93096 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PTP4A1Q93096 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTP4A1Q93096 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTP4A1Q93096 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.1■□□□□ 0.49
PTP4A1Q93096 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.1■□□□□ 0.49
PTP4A1Q93096 AC007322.3-201ENST00000426526 701 ntBASIC18.1■□□□□ 0.49
PTP4A1Q93096 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PTP4A1Q93096 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
PTP4A1Q93096 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.1■□□□□ 0.49
PTP4A1Q93096 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.1■□□□□ 0.49
PTP4A1Q93096 NTF6G-201ENST00000591094 616 ntBASIC18.1■□□□□ 0.49
PTP4A1Q93096 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.1■□□□□ 0.49
PTP4A1Q93096 MIR5787-201ENST00000611784 55 ntBASIC18.1■□□□□ 0.49
PTP4A1Q93096 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.1■□□□□ 0.49
PTP4A1Q93096 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTP4A1Q93096 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTP4A1Q93096 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms