Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SLC44A1Q8WWI5 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC44A1Q8WWI5 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC44A1Q8WWI5 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.25■□□□□ 0.83
SLC44A1Q8WWI5 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
SLC44A1Q8WWI5 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC44A1Q8WWI5 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.25■□□□□ 0.83
SLC44A1Q8WWI5 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC44A1Q8WWI5 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC44A1Q8WWI5 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.25■□□□□ 0.83
SLC44A1Q8WWI5 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.25■□□□□ 0.83
SLC44A1Q8WWI5 SLC7A5P1-201ENST00000568957 537 ntBASIC20.25■□□□□ 0.83
SLC44A1Q8WWI5 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SLC44A1Q8WWI5 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
SLC44A1Q8WWI5 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SLC44A1Q8WWI5 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.25■□□□□ 0.83
SLC44A1Q8WWI5 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC44A1Q8WWI5 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.24■□□□□ 0.83
SLC44A1Q8WWI5 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC44A1Q8WWI5 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
SLC44A1Q8WWI5 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC44A1Q8WWI5 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC44A1Q8WWI5 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC44A1Q8WWI5 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC44A1Q8WWI5 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC44A1Q8WWI5 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC44A1Q8WWI5 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
SLC44A1Q8WWI5 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.24■□□□□ 0.83
SLC44A1Q8WWI5 AC105265.2-201ENST00000467189 838 ntBASIC20.24■□□□□ 0.83
SLC44A1Q8WWI5 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.24■□□□□ 0.83
SLC44A1Q8WWI5 FAM21FP-204ENST00000608637 956 ntBASIC20.24■□□□□ 0.83
SLC44A1Q8WWI5 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC44A1Q8WWI5 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC44A1Q8WWI5 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC44A1Q8WWI5 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC44A1Q8WWI5 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC44A1Q8WWI5 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SLC44A1Q8WWI5 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SLC44A1Q8WWI5 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC44A1Q8WWI5 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC44A1Q8WWI5 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC44A1Q8WWI5 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SLC44A1Q8WWI5 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.23■□□□□ 0.83
SLC44A1Q8WWI5 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.23■□□□□ 0.83
SLC44A1Q8WWI5 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.23■□□□□ 0.83
SLC44A1Q8WWI5 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SLC44A1Q8WWI5 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC44A1Q8WWI5 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC44A1Q8WWI5 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.23■□□□□ 0.83
SLC44A1Q8WWI5 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.23■□□□□ 0.83
SLC44A1Q8WWI5 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SLC44A1Q8WWI5 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.23■□□□□ 0.83
SLC44A1Q8WWI5 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.23■□□□□ 0.83
SLC44A1Q8WWI5 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.23■□□□□ 0.83
SLC44A1Q8WWI5 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC44A1Q8WWI5 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC44A1Q8WWI5 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.23■□□□□ 0.83
SLC44A1Q8WWI5 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.22■□□□□ 0.83
SLC44A1Q8WWI5 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
SLC44A1Q8WWI5 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SLC44A1Q8WWI5 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC44A1Q8WWI5 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC44A1Q8WWI5 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.22■□□□□ 0.83
SLC44A1Q8WWI5 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SLC44A1Q8WWI5 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.22■□□□□ 0.83
SLC44A1Q8WWI5 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SLC44A1Q8WWI5 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SLC44A1Q8WWI5 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.22■□□□□ 0.83
SLC44A1Q8WWI5 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.22■□□□□ 0.83
SLC44A1Q8WWI5 TERF1P2-201ENST00000583350 1212 ntBASIC20.22■□□□□ 0.83
SLC44A1Q8WWI5 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.22■□□□□ 0.83
SLC44A1Q8WWI5 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SLC44A1Q8WWI5 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.22■□□□□ 0.83
SLC44A1Q8WWI5 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.22■□□□□ 0.83
SLC44A1Q8WWI5 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC44A1Q8WWI5 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC44A1Q8WWI5 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC44A1Q8WWI5 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SLC44A1Q8WWI5 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
SLC44A1Q8WWI5 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SLC44A1Q8WWI5 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SLC44A1Q8WWI5 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.21■□□□□ 0.83
SLC44A1Q8WWI5 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.21■□□□□ 0.83
SLC44A1Q8WWI5 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC44A1Q8WWI5 TREX1-205ENST00000625293 1783 ntBASIC20.21■□□□□ 0.83
SLC44A1Q8WWI5 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC44A1Q8WWI5 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
SLC44A1Q8WWI5 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.21■□□□□ 0.83
SLC44A1Q8WWI5 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC44A1Q8WWI5 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.21■□□□□ 0.83
SLC44A1Q8WWI5 AC123595.1-201ENST00000440769 1046 ntBASIC20.21■□□□□ 0.83
SLC44A1Q8WWI5 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.21■□□□□ 0.83
SLC44A1Q8WWI5 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.21■□□□□ 0.83
SLC44A1Q8WWI5 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC44A1Q8WWI5 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
SLC44A1Q8WWI5 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC44A1Q8WWI5 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC44A1Q8WWI5 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
SLC44A1Q8WWI5 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SLC44A1Q8WWI5 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms