Protein–RNA interactions for Protein: Q8TDI8

TMC1, Transmembrane channel-like protein 1, humanhuman

Predictions only

Length 760 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1Q8TDI8 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC28.13■■■□□ 2.09
TMC1Q8TDI8 AC027702.1-201ENST00000563810 1770 ntBASIC28.13■■■□□ 2.09
TMC1Q8TDI8 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
TMC1Q8TDI8 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC28.13■■■□□ 2.09
TMC1Q8TDI8 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC28.12■■■□□ 2.09
TMC1Q8TDI8 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC28.12■■■□□ 2.09
TMC1Q8TDI8 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
TMC1Q8TDI8 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
TMC1Q8TDI8 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC28.12■■■□□ 2.09
TMC1Q8TDI8 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC28.12■■■□□ 2.09
TMC1Q8TDI8 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC28.12■■■□□ 2.09
TMC1Q8TDI8 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC28.12■■■□□ 2.09
TMC1Q8TDI8 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC28.12■■■□□ 2.09
TMC1Q8TDI8 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
TMC1Q8TDI8 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC28.12■■■□□ 2.09
TMC1Q8TDI8 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC28.12■■■□□ 2.09
TMC1Q8TDI8 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC28.12■■■□□ 2.09
TMC1Q8TDI8 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
TMC1Q8TDI8 AC121338.2-201ENST00000622535 1744 ntBASIC28.12■■■□□ 2.09
TMC1Q8TDI8 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
TMC1Q8TDI8 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
TMC1Q8TDI8 PLK5-205ENST00000642079 1969 ntBASIC28.11■■■□□ 2.09
TMC1Q8TDI8 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
TMC1Q8TDI8 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
TMC1Q8TDI8 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC28.11■■■□□ 2.09
TMC1Q8TDI8 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
TMC1Q8TDI8 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
TMC1Q8TDI8 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC28.11■■■□□ 2.09
TMC1Q8TDI8 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC28.11■■■□□ 2.09
TMC1Q8TDI8 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC28.11■■■□□ 2.09
TMC1Q8TDI8 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC28.11■■■□□ 2.09
TMC1Q8TDI8 AC006557.6-201ENST00000623071 864 ntBASIC28.11■■■□□ 2.09
TMC1Q8TDI8 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC28.11■■■□□ 2.09
TMC1Q8TDI8 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC28.11■■■□□ 2.09
TMC1Q8TDI8 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
TMC1Q8TDI8 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
TMC1Q8TDI8 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
TMC1Q8TDI8 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
TMC1Q8TDI8 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC28.11■■■□□ 2.09
TMC1Q8TDI8 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC28.11■■■□□ 2.09
TMC1Q8TDI8 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC28.11■■■□□ 2.09
TMC1Q8TDI8 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC28.1■■■□□ 2.09
TMC1Q8TDI8 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC28.1■■■□□ 2.09
TMC1Q8TDI8 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC28.1■■■□□ 2.09
TMC1Q8TDI8 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
TMC1Q8TDI8 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC28.1■■■□□ 2.09
TMC1Q8TDI8 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC28.1■■■□□ 2.09
TMC1Q8TDI8 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
TMC1Q8TDI8 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
TMC1Q8TDI8 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC28.1■■■□□ 2.09
TMC1Q8TDI8 KLF2-202ENST00000592003 564 ntTSL 3 BASIC28.1■■■□□ 2.09
TMC1Q8TDI8 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC28.1■■■□□ 2.09
TMC1Q8TDI8 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC28.1■■■□□ 2.09
TMC1Q8TDI8 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC28.1■■■□□ 2.09
TMC1Q8TDI8 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
TMC1Q8TDI8 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
TMC1Q8TDI8 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
TMC1Q8TDI8 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC28.09■■■□□ 2.09
TMC1Q8TDI8 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
TMC1Q8TDI8 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC28.09■■■□□ 2.09
TMC1Q8TDI8 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
TMC1Q8TDI8 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
TMC1Q8TDI8 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC28.09■■■□□ 2.09
TMC1Q8TDI8 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
TMC1Q8TDI8 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
TMC1Q8TDI8 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
TMC1Q8TDI8 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC28.09■■■□□ 2.09
TMC1Q8TDI8 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
TMC1Q8TDI8 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC28.09■■■□□ 2.09
TMC1Q8TDI8 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC28.09■■■□□ 2.09
TMC1Q8TDI8 AL359736.2-201ENST00000621992 437 ntBASIC28.09■■■□□ 2.09
TMC1Q8TDI8 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC28.09■■■□□ 2.09
TMC1Q8TDI8 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC28.09■■■□□ 2.09
TMC1Q8TDI8 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC28.09■■■□□ 2.09
TMC1Q8TDI8 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
TMC1Q8TDI8 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
TMC1Q8TDI8 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC28.08■■■□□ 2.09
TMC1Q8TDI8 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC28.08■■■□□ 2.09
TMC1Q8TDI8 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
TMC1Q8TDI8 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC28.08■■■□□ 2.09
TMC1Q8TDI8 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
TMC1Q8TDI8 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC28.08■■■□□ 2.09
TMC1Q8TDI8 GGT1-206ENST00000404223 952 ntTSL 2 BASIC28.08■■■□□ 2.09
TMC1Q8TDI8 C1QBPP2-201ENST00000528754 825 ntBASIC28.08■■■□□ 2.09
TMC1Q8TDI8 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC28.08■■■□□ 2.09
TMC1Q8TDI8 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
TMC1Q8TDI8 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
TMC1Q8TDI8 AP006294.2-201ENST00000641667 209 ntBASIC28.08■■■□□ 2.09
TMC1Q8TDI8 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
TMC1Q8TDI8 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
TMC1Q8TDI8 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC28.08■■■□□ 2.09
TMC1Q8TDI8 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
TMC1Q8TDI8 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
TMC1Q8TDI8 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
TMC1Q8TDI8 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC28.07■■■□□ 2.08
TMC1Q8TDI8 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
TMC1Q8TDI8 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC28.07■■■□□ 2.08
TMC1Q8TDI8 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC28.07■■■□□ 2.08
TMC1Q8TDI8 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC28.07■■■□□ 2.08
TMC1Q8TDI8 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC28.07■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms