Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.01■□□□□ 0.95
CCHCR1Q8TD31 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.01■□□□□ 0.95
CCHCR1Q8TD31 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCHCR1Q8TD31 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.01■□□□□ 0.95
CCHCR1Q8TD31 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.01■□□□□ 0.95
CCHCR1Q8TD31 MIR2861-201ENST00000636310 90 ntBASIC21.01■□□□□ 0.95
CCHCR1Q8TD31 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
CCHCR1Q8TD31 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCHCR1Q8TD31 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.01■□□□□ 0.95
CCHCR1Q8TD31 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.01■□□□□ 0.95
CCHCR1Q8TD31 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCHCR1Q8TD31 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCHCR1Q8TD31 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCHCR1Q8TD31 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCHCR1Q8TD31 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CCHCR1Q8TD31 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
CCHCR1Q8TD31 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
CCHCR1Q8TD31 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCHCR1Q8TD31 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCHCR1Q8TD31 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21■□□□□ 0.95
CCHCR1Q8TD31 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21■□□□□ 0.95
CCHCR1Q8TD31 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21■□□□□ 0.95
CCHCR1Q8TD31 AC112907.3-201ENST00000577781 2400 ntBASIC21■□□□□ 0.95
CCHCR1Q8TD31 PCDHAC2-203ENST00000615316 3011 ntBASIC21■□□□□ 0.95
CCHCR1Q8TD31 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCHCR1Q8TD31 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCHCR1Q8TD31 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CCHCR1Q8TD31 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21■□□□□ 0.95
CCHCR1Q8TD31 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCHCR1Q8TD31 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCHCR1Q8TD31 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC21■□□□□ 0.95
CCHCR1Q8TD31 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCHCR1Q8TD31 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CCHCR1Q8TD31 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCHCR1Q8TD31 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
CCHCR1Q8TD31 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
CCHCR1Q8TD31 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCHCR1Q8TD31 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCHCR1Q8TD31 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCHCR1Q8TD31 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.99■□□□□ 0.95
CCHCR1Q8TD31 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.99■□□□□ 0.95
CCHCR1Q8TD31 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
CCHCR1Q8TD31 UBE2DNL-204ENST00000602536 740 ntBASIC20.99■□□□□ 0.95
CCHCR1Q8TD31 AL137784.2-201ENST00000607332 1000 ntBASIC20.99■□□□□ 0.95
CCHCR1Q8TD31 AC092666.2-201ENST00000613287 246 ntBASIC20.99■□□□□ 0.95
CCHCR1Q8TD31 TCF3P1-201ENST00000423021 1937 ntBASIC20.99■□□□□ 0.95
CCHCR1Q8TD31 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
CCHCR1Q8TD31 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.99■□□□□ 0.95
CCHCR1Q8TD31 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCHCR1Q8TD31 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.99■□□□□ 0.95
CCHCR1Q8TD31 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CCHCR1Q8TD31 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.98■□□□□ 0.95
CCHCR1Q8TD31 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.98■□□□□ 0.95
CCHCR1Q8TD31 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.98■□□□□ 0.95
CCHCR1Q8TD31 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCHCR1Q8TD31 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.98■□□□□ 0.95
CCHCR1Q8TD31 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CCHCR1Q8TD31 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.98■□□□□ 0.95
CCHCR1Q8TD31 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CCHCR1Q8TD31 AC006015.1-201ENST00000429970 570 ntBASIC20.98■□□□□ 0.95
CCHCR1Q8TD31 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCHCR1Q8TD31 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.98■□□□□ 0.95
CCHCR1Q8TD31 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCHCR1Q8TD31 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.98■□□□□ 0.95
CCHCR1Q8TD31 SLC7A5P2-201ENST00000553010 536 ntBASIC20.98■□□□□ 0.95
CCHCR1Q8TD31 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.98■□□□□ 0.95
CCHCR1Q8TD31 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCHCR1Q8TD31 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.98■□□□□ 0.95
CCHCR1Q8TD31 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCHCR1Q8TD31 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCHCR1Q8TD31 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCHCR1Q8TD31 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CCHCR1Q8TD31 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.98■□□□□ 0.95
CCHCR1Q8TD31 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.98■□□□□ 0.95
CCHCR1Q8TD31 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCHCR1Q8TD31 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCHCR1Q8TD31 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCHCR1Q8TD31 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCHCR1Q8TD31 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCHCR1Q8TD31 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
CCHCR1Q8TD31 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCHCR1Q8TD31 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CCHCR1Q8TD31 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.97■□□□□ 0.95
CCHCR1Q8TD31 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCHCR1Q8TD31 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCHCR1Q8TD31 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.97■□□□□ 0.95
CCHCR1Q8TD31 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
CCHCR1Q8TD31 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.97■□□□□ 0.95
CCHCR1Q8TD31 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.97■□□□□ 0.95
CCHCR1Q8TD31 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCHCR1Q8TD31 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCHCR1Q8TD31 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCHCR1Q8TD31 SLC7A5P1-201ENST00000568957 537 ntBASIC20.97■□□□□ 0.95
CCHCR1Q8TD31 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.97■□□□□ 0.95
CCHCR1Q8TD31 MYCNOS-205ENST00000641950 531 ntBASIC20.97■□□□□ 0.95
CCHCR1Q8TD31 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCHCR1Q8TD31 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCHCR1Q8TD31 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCHCR1Q8TD31 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.97■□□□□ 0.95
CCHCR1Q8TD31 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms