Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC13.76□□□□□ -0.21
ALMS1Q8TCU4 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC13.76□□□□□ -0.21
ALMS1Q8TCU4 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC13.76□□□□□ -0.21
ALMS1Q8TCU4 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC13.76□□□□□ -0.21
ALMS1Q8TCU4 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC13.76□□□□□ -0.21
ALMS1Q8TCU4 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ALMS1Q8TCU4 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
ALMS1Q8TCU4 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
ALMS1Q8TCU4 AK4P3-201ENST00000418260 669 ntBASIC13.75□□□□□ -0.21
ALMS1Q8TCU4 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ALMS1Q8TCU4 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC13.75□□□□□ -0.21
ALMS1Q8TCU4 DBP-204ENST00000599385 709 ntTSL 3 BASIC13.75□□□□□ -0.21
ALMS1Q8TCU4 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC13.75□□□□□ -0.21
ALMS1Q8TCU4 CR392000.1-201ENST00000624770 1228 ntBASIC13.75□□□□□ -0.21
ALMS1Q8TCU4 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
ALMS1Q8TCU4 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC13.75□□□□□ -0.21
ALMS1Q8TCU4 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
ALMS1Q8TCU4 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ALMS1Q8TCU4 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC13.75□□□□□ -0.21
ALMS1Q8TCU4 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC13.75□□□□□ -0.21
ALMS1Q8TCU4 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC13.75□□□□□ -0.21
ALMS1Q8TCU4 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
ALMS1Q8TCU4 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ALMS1Q8TCU4 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC13.75□□□□□ -0.21
ALMS1Q8TCU4 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC13.75□□□□□ -0.21
ALMS1Q8TCU4 AC139887.4-201ENST00000607877 719 ntBASIC13.75□□□□□ -0.21
ALMS1Q8TCU4 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC13.75□□□□□ -0.21
ALMS1Q8TCU4 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC13.75□□□□□ -0.21
ALMS1Q8TCU4 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ALMS1Q8TCU4 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ALMS1Q8TCU4 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
ALMS1Q8TCU4 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
ALMS1Q8TCU4 HCG4P8-203ENST00000443049 980 ntBASIC13.75□□□□□ -0.21
ALMS1Q8TCU4 FAM207BP-201ENST00000447172 505 ntBASIC13.75□□□□□ -0.21
ALMS1Q8TCU4 AL445675.2-201ENST00000620291 557 ntBASIC13.75□□□□□ -0.21
ALMS1Q8TCU4 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ALMS1Q8TCU4 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC13.75□□□□□ -0.21
ALMS1Q8TCU4 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC13.74□□□□□ -0.21
ALMS1Q8TCU4 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
ALMS1Q8TCU4 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ALMS1Q8TCU4 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
ALMS1Q8TCU4 TSPY14P-201ENST00000303979 915 ntBASIC13.74□□□□□ -0.21
ALMS1Q8TCU4 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
ALMS1Q8TCU4 AC093458.2-201ENST00000623150 629 ntBASIC13.74□□□□□ -0.21
ALMS1Q8TCU4 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC13.74□□□□□ -0.21
ALMS1Q8TCU4 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ALMS1Q8TCU4 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ALMS1Q8TCU4 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
ALMS1Q8TCU4 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ALMS1Q8TCU4 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ALMS1Q8TCU4 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ALMS1Q8TCU4 CLN6-214ENST00000636314 442 ntTSL 3 BASIC13.74□□□□□ -0.21
ALMS1Q8TCU4 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ALMS1Q8TCU4 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
ALMS1Q8TCU4 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ALMS1Q8TCU4 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC13.74□□□□□ -0.21
ALMS1Q8TCU4 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ALMS1Q8TCU4 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC13.74□□□□□ -0.21
ALMS1Q8TCU4 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ALMS1Q8TCU4 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ALMS1Q8TCU4 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ALMS1Q8TCU4 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
ALMS1Q8TCU4 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
ALMS1Q8TCU4 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC13.73□□□□□ -0.21
ALMS1Q8TCU4 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC13.73□□□□□ -0.21
ALMS1Q8TCU4 AL450487.1-201ENST00000426799 995 ntBASIC13.73□□□□□ -0.21
ALMS1Q8TCU4 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC13.73□□□□□ -0.21
ALMS1Q8TCU4 AL359075.1-203ENST00000462729 1002 ntBASIC13.73□□□□□ -0.21
ALMS1Q8TCU4 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC13.73□□□□□ -0.21
ALMS1Q8TCU4 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ALMS1Q8TCU4 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC13.73□□□□□ -0.21
ALMS1Q8TCU4 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC13.73□□□□□ -0.21
ALMS1Q8TCU4 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ALMS1Q8TCU4 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
ALMS1Q8TCU4 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ALMS1Q8TCU4 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC13.73□□□□□ -0.21
ALMS1Q8TCU4 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC13.73□□□□□ -0.21
ALMS1Q8TCU4 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ALMS1Q8TCU4 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC13.73□□□□□ -0.21
ALMS1Q8TCU4 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ALMS1Q8TCU4 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC13.73□□□□□ -0.21
ALMS1Q8TCU4 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
ALMS1Q8TCU4 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ALMS1Q8TCU4 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ALMS1Q8TCU4 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC13.73□□□□□ -0.21
ALMS1Q8TCU4 AC063952.2-201ENST00000498792 1227 ntBASIC13.73□□□□□ -0.21
ALMS1Q8TCU4 AL031985.4-201ENST00000642138 673 ntBASIC13.73□□□□□ -0.21
ALMS1Q8TCU4 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
ALMS1Q8TCU4 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ALMS1Q8TCU4 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
ALMS1Q8TCU4 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
ALMS1Q8TCU4 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ALMS1Q8TCU4 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ALMS1Q8TCU4 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ALMS1Q8TCU4 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
ALMS1Q8TCU4 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ALMS1Q8TCU4 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ALMS1Q8TCU4 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ALMS1Q8TCU4 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
ALMS1Q8TCU4 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms