Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
CLHC1Q8NHS4 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.37■□□□□ 0.69
CLHC1Q8NHS4 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.37■□□□□ 0.69
CLHC1Q8NHS4 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLHC1Q8NHS4 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLHC1Q8NHS4 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLHC1Q8NHS4 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.37■□□□□ 0.69
CLHC1Q8NHS4 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLHC1Q8NHS4 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLHC1Q8NHS4 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CLHC1Q8NHS4 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLHC1Q8NHS4 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLHC1Q8NHS4 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.37■□□□□ 0.69
CLHC1Q8NHS4 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLHC1Q8NHS4 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CLHC1Q8NHS4 KRT8P36-201ENST00000489121 1440 ntBASIC19.36■□□□□ 0.69
CLHC1Q8NHS4 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
CLHC1Q8NHS4 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CLHC1Q8NHS4 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.36■□□□□ 0.69
CLHC1Q8NHS4 NTF6G-201ENST00000591094 616 ntBASIC19.36■□□□□ 0.69
CLHC1Q8NHS4 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.36■□□□□ 0.69
CLHC1Q8NHS4 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CLHC1Q8NHS4 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.36■□□□□ 0.69
CLHC1Q8NHS4 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLHC1Q8NHS4 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.36■□□□□ 0.69
CLHC1Q8NHS4 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLHC1Q8NHS4 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.36■□□□□ 0.69
CLHC1Q8NHS4 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CLHC1Q8NHS4 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CLHC1Q8NHS4 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLHC1Q8NHS4 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.36■□□□□ 0.69
CLHC1Q8NHS4 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CLHC1Q8NHS4 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLHC1Q8NHS4 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CLHC1Q8NHS4 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CLHC1Q8NHS4 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLHC1Q8NHS4 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLHC1Q8NHS4 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
CLHC1Q8NHS4 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLHC1Q8NHS4 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.35■□□□□ 0.69
CLHC1Q8NHS4 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.35■□□□□ 0.69
CLHC1Q8NHS4 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.35■□□□□ 0.69
CLHC1Q8NHS4 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.35■□□□□ 0.69
CLHC1Q8NHS4 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.35■□□□□ 0.69
CLHC1Q8NHS4 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.35■□□□□ 0.69
CLHC1Q8NHS4 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLHC1Q8NHS4 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLHC1Q8NHS4 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.35■□□□□ 0.69
CLHC1Q8NHS4 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.35■□□□□ 0.69
CLHC1Q8NHS4 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CLHC1Q8NHS4 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.35■□□□□ 0.69
CLHC1Q8NHS4 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLHC1Q8NHS4 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CLHC1Q8NHS4 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLHC1Q8NHS4 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLHC1Q8NHS4 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLHC1Q8NHS4 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.34■□□□□ 0.69
CLHC1Q8NHS4 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.34■□□□□ 0.69
CLHC1Q8NHS4 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLHC1Q8NHS4 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.34■□□□□ 0.69
CLHC1Q8NHS4 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLHC1Q8NHS4 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.34■□□□□ 0.69
CLHC1Q8NHS4 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLHC1Q8NHS4 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLHC1Q8NHS4 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.34■□□□□ 0.69
CLHC1Q8NHS4 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.34■□□□□ 0.69
CLHC1Q8NHS4 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLHC1Q8NHS4 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.34■□□□□ 0.69
CLHC1Q8NHS4 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CLHC1Q8NHS4 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.34■□□□□ 0.69
CLHC1Q8NHS4 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
CLHC1Q8NHS4 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLHC1Q8NHS4 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.34■□□□□ 0.69
CLHC1Q8NHS4 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.33■□□□□ 0.69
CLHC1Q8NHS4 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLHC1Q8NHS4 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLHC1Q8NHS4 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLHC1Q8NHS4 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLHC1Q8NHS4 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CLHC1Q8NHS4 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
CLHC1Q8NHS4 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.33■□□□□ 0.69
CLHC1Q8NHS4 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLHC1Q8NHS4 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLHC1Q8NHS4 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.33■□□□□ 0.69
CLHC1Q8NHS4 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLHC1Q8NHS4 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.33■□□□□ 0.69
CLHC1Q8NHS4 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLHC1Q8NHS4 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLHC1Q8NHS4 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CLHC1Q8NHS4 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
CLHC1Q8NHS4 CDV3P1-201ENST00000471403 739 ntBASIC19.33■□□□□ 0.68
CLHC1Q8NHS4 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CLHC1Q8NHS4 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.33■□□□□ 0.68
CLHC1Q8NHS4 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CLHC1Q8NHS4 FAM21FP-204ENST00000608637 956 ntBASIC19.33■□□□□ 0.68
CLHC1Q8NHS4 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLHC1Q8NHS4 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CLHC1Q8NHS4 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLHC1Q8NHS4 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.33■□□□□ 0.68
CLHC1Q8NHS4 AC007952.6-201ENST00000573168 2673 ntBASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms