Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.69■□□□□ 0.42
CPEB3Q8NE35 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
CPEB3Q8NE35 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.69■□□□□ 0.42
CPEB3Q8NE35 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.69■□□□□ 0.42
CPEB3Q8NE35 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CPEB3Q8NE35 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CPEB3Q8NE35 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.69■□□□□ 0.42
CPEB3Q8NE35 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPEB3Q8NE35 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPEB3Q8NE35 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CPEB3Q8NE35 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CPEB3Q8NE35 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.68■□□□□ 0.42
CPEB3Q8NE35 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.68■□□□□ 0.42
CPEB3Q8NE35 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPEB3Q8NE35 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CPEB3Q8NE35 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CPEB3Q8NE35 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CPEB3Q8NE35 KRT17P1-201ENST00000399211 1546 ntBASIC17.68■□□□□ 0.42
CPEB3Q8NE35 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.68■□□□□ 0.42
CPEB3Q8NE35 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CPEB3Q8NE35 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC17.68■□□□□ 0.42
CPEB3Q8NE35 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CPEB3Q8NE35 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPEB3Q8NE35 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPEB3Q8NE35 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
CPEB3Q8NE35 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.68■□□□□ 0.42
CPEB3Q8NE35 GPX1P1-201ENST00000388829 606 ntBASIC17.68■□□□□ 0.42
CPEB3Q8NE35 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CPEB3Q8NE35 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CPEB3Q8NE35 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CPEB3Q8NE35 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPEB3Q8NE35 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPEB3Q8NE35 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CPEB3Q8NE35 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.68■□□□□ 0.42
CPEB3Q8NE35 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPEB3Q8NE35 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC17.68■□□□□ 0.42
CPEB3Q8NE35 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.68■□□□□ 0.42
CPEB3Q8NE35 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.68■□□□□ 0.42
CPEB3Q8NE35 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPEB3Q8NE35 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CPEB3Q8NE35 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CPEB3Q8NE35 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPEB3Q8NE35 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CPEB3Q8NE35 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPEB3Q8NE35 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPEB3Q8NE35 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPEB3Q8NE35 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.67■□□□□ 0.42
CPEB3Q8NE35 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.67■□□□□ 0.42
CPEB3Q8NE35 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPEB3Q8NE35 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.67■□□□□ 0.42
CPEB3Q8NE35 AIRN-201ENST00000601203 4374 ntBASIC17.67■□□□□ 0.42
CPEB3Q8NE35 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CPEB3Q8NE35 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
CPEB3Q8NE35 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPEB3Q8NE35 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPEB3Q8NE35 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC17.67■□□□□ 0.42
CPEB3Q8NE35 GUSBP6-202ENST00000438529 1198 ntBASIC17.67■□□□□ 0.42
CPEB3Q8NE35 TSPY6P-201ENST00000448518 926 ntBASIC17.67■□□□□ 0.42
CPEB3Q8NE35 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC17.67■□□□□ 0.42
CPEB3Q8NE35 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.67■□□□□ 0.42
CPEB3Q8NE35 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC17.67■□□□□ 0.42
CPEB3Q8NE35 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.67■□□□□ 0.42
CPEB3Q8NE35 AC105020.6-201ENST00000621523 1217 ntBASIC17.67■□□□□ 0.42
CPEB3Q8NE35 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPEB3Q8NE35 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPEB3Q8NE35 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPEB3Q8NE35 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPEB3Q8NE35 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPEB3Q8NE35 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.67■□□□□ 0.42
CPEB3Q8NE35 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPEB3Q8NE35 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPEB3Q8NE35 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPEB3Q8NE35 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPEB3Q8NE35 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.66■□□□□ 0.42
CPEB3Q8NE35 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPEB3Q8NE35 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPEB3Q8NE35 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPEB3Q8NE35 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPEB3Q8NE35 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPEB3Q8NE35 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CPEB3Q8NE35 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CPEB3Q8NE35 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.66■□□□□ 0.42
CPEB3Q8NE35 BX276092.2-201ENST00000417668 665 ntBASIC17.66■□□□□ 0.42
CPEB3Q8NE35 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.66■□□□□ 0.42
CPEB3Q8NE35 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CPEB3Q8NE35 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CPEB3Q8NE35 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.66■□□□□ 0.42
CPEB3Q8NE35 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPEB3Q8NE35 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.66■□□□□ 0.42
CPEB3Q8NE35 LINC01521-201ENST00000504184 1943 ntBASIC17.66■□□□□ 0.42
CPEB3Q8NE35 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPEB3Q8NE35 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.66■□□□□ 0.42
CPEB3Q8NE35 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPEB3Q8NE35 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.66■□□□□ 0.42
CPEB3Q8NE35 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.66■□□□□ 0.42
CPEB3Q8NE35 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CPEB3Q8NE35 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
CPEB3Q8NE35 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPEB3Q8NE35 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPEB3Q8NE35 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms