Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC22.58■■□□□ 1.21
USP38Q8NB14 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
USP38Q8NB14 RN7SL471P-201ENST00000580476 299 ntBASIC22.58■■□□□ 1.21
USP38Q8NB14 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC22.58■■□□□ 1.21
USP38Q8NB14 CRK-204ENST00000574295 1391 ntTSL 5 BASIC22.58■■□□□ 1.21
USP38Q8NB14 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
USP38Q8NB14 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
USP38Q8NB14 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
USP38Q8NB14 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC22.57■■□□□ 1.2
USP38Q8NB14 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
USP38Q8NB14 ARMC10P1-201ENST00000313754 855 ntBASIC22.57■■□□□ 1.2
USP38Q8NB14 MFF-205ENST00000354503 1085 ntTSL 2 BASIC22.57■■□□□ 1.2
USP38Q8NB14 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
USP38Q8NB14 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
USP38Q8NB14 TSPY15P-201ENST00000457163 923 ntBASIC22.57■■□□□ 1.2
USP38Q8NB14 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC22.57■■□□□ 1.2
USP38Q8NB14 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC22.57■■□□□ 1.2
USP38Q8NB14 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
USP38Q8NB14 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
USP38Q8NB14 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
USP38Q8NB14 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
USP38Q8NB14 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
USP38Q8NB14 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
USP38Q8NB14 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
USP38Q8NB14 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC22.57■■□□□ 1.2
USP38Q8NB14 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC22.57■■□□□ 1.2
USP38Q8NB14 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC22.57■■□□□ 1.2
USP38Q8NB14 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
USP38Q8NB14 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC22.56■■□□□ 1.2
USP38Q8NB14 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
USP38Q8NB14 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
USP38Q8NB14 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
USP38Q8NB14 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC22.56■■□□□ 1.2
USP38Q8NB14 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
USP38Q8NB14 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
USP38Q8NB14 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
USP38Q8NB14 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC22.56■■□□□ 1.2
USP38Q8NB14 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
USP38Q8NB14 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
USP38Q8NB14 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
USP38Q8NB14 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
USP38Q8NB14 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
USP38Q8NB14 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
USP38Q8NB14 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
USP38Q8NB14 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC22.56■■□□□ 1.2
USP38Q8NB14 REXO2-216ENST00000544196 452 ntTSL 3 BASIC22.56■■□□□ 1.2
USP38Q8NB14 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC22.56■■□□□ 1.2
USP38Q8NB14 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC22.56■■□□□ 1.2
USP38Q8NB14 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC22.56■■□□□ 1.2
USP38Q8NB14 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
USP38Q8NB14 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC22.56■■□□□ 1.2
USP38Q8NB14 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
USP38Q8NB14 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
USP38Q8NB14 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC22.56■■□□□ 1.2
USP38Q8NB14 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
USP38Q8NB14 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC22.56■■□□□ 1.2
USP38Q8NB14 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
USP38Q8NB14 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
USP38Q8NB14 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC22.55■■□□□ 1.2
USP38Q8NB14 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
USP38Q8NB14 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
USP38Q8NB14 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC22.55■■□□□ 1.2
USP38Q8NB14 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC22.55■■□□□ 1.2
USP38Q8NB14 OR2A1-AS1-207ENST00000486094 819 ntBASIC22.55■■□□□ 1.2
USP38Q8NB14 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
USP38Q8NB14 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
USP38Q8NB14 C2orf69P4-201ENST00000565394 541 ntBASIC22.55■■□□□ 1.2
USP38Q8NB14 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC22.55■■□□□ 1.2
USP38Q8NB14 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC22.55■■□□□ 1.2
USP38Q8NB14 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC22.55■■□□□ 1.2
USP38Q8NB14 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
USP38Q8NB14 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
USP38Q8NB14 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
USP38Q8NB14 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
USP38Q8NB14 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
USP38Q8NB14 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
USP38Q8NB14 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
USP38Q8NB14 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC22.55■■□□□ 1.2
USP38Q8NB14 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
USP38Q8NB14 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC22.54■■□□□ 1.2
USP38Q8NB14 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC22.54■■□□□ 1.2
USP38Q8NB14 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
USP38Q8NB14 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
USP38Q8NB14 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC22.54■■□□□ 1.2
USP38Q8NB14 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC22.54■■□□□ 1.2
USP38Q8NB14 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC22.54■■□□□ 1.2
USP38Q8NB14 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
USP38Q8NB14 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
USP38Q8NB14 REXO2-208ENST00000539754 791 ntTSL 2 BASIC22.54■■□□□ 1.2
USP38Q8NB14 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC22.54■■□□□ 1.2
USP38Q8NB14 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC22.54■■□□□ 1.2
USP38Q8NB14 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC22.54■■□□□ 1.2
USP38Q8NB14 AC012306.2-201ENST00000609350 630 ntBASIC22.54■■□□□ 1.2
USP38Q8NB14 AC097493.4-201ENST00000641197 219 ntBASIC22.54■■□□□ 1.2
USP38Q8NB14 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
USP38Q8NB14 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
USP38Q8NB14 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
USP38Q8NB14 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC22.54■■□□□ 1.2
USP38Q8NB14 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC22.54■■□□□ 1.2
USP38Q8NB14 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms