Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ARHGEF39Q8N4T4 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.12■□□□□ 0.65
ARHGEF39Q8N4T4 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ARHGEF39Q8N4T4 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ARHGEF39Q8N4T4 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ARHGEF39Q8N4T4 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
ARHGEF39Q8N4T4 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.11■□□□□ 0.65
ARHGEF39Q8N4T4 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ARHGEF39Q8N4T4 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.11■□□□□ 0.65
ARHGEF39Q8N4T4 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.11■□□□□ 0.65
ARHGEF39Q8N4T4 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.11■□□□□ 0.65
ARHGEF39Q8N4T4 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
ARHGEF39Q8N4T4 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
ARHGEF39Q8N4T4 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.11■□□□□ 0.65
ARHGEF39Q8N4T4 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
ARHGEF39Q8N4T4 ESRRAP1-201ENST00000400596 1257 ntBASIC19.11■□□□□ 0.65
ARHGEF39Q8N4T4 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.11■□□□□ 0.65
ARHGEF39Q8N4T4 AC026366.1-201ENST00000488803 879 ntBASIC19.11■□□□□ 0.65
ARHGEF39Q8N4T4 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
ARHGEF39Q8N4T4 AP003097.1-201ENST00000530657 1135 ntBASIC19.11■□□□□ 0.65
ARHGEF39Q8N4T4 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ARHGEF39Q8N4T4 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ARHGEF39Q8N4T4 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
ARHGEF39Q8N4T4 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
ARHGEF39Q8N4T4 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ARHGEF39Q8N4T4 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ARHGEF39Q8N4T4 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ARHGEF39Q8N4T4 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.11■□□□□ 0.65
ARHGEF39Q8N4T4 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ARHGEF39Q8N4T4 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
ARHGEF39Q8N4T4 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ARHGEF39Q8N4T4 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ARHGEF39Q8N4T4 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ARHGEF39Q8N4T4 AC092720.2-201ENST00000602388 1665 ntBASIC19.11■□□□□ 0.65
ARHGEF39Q8N4T4 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ARHGEF39Q8N4T4 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ARHGEF39Q8N4T4 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
ARHGEF39Q8N4T4 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
ARHGEF39Q8N4T4 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
ARHGEF39Q8N4T4 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.1■□□□□ 0.65
ARHGEF39Q8N4T4 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ARHGEF39Q8N4T4 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
ARHGEF39Q8N4T4 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ARHGEF39Q8N4T4 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
ARHGEF39Q8N4T4 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
ARHGEF39Q8N4T4 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ARHGEF39Q8N4T4 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ARHGEF39Q8N4T4 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.1■□□□□ 0.65
ARHGEF39Q8N4T4 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.1■□□□□ 0.65
ARHGEF39Q8N4T4 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
ARHGEF39Q8N4T4 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ARHGEF39Q8N4T4 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.1■□□□□ 0.65
ARHGEF39Q8N4T4 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.1■□□□□ 0.65
ARHGEF39Q8N4T4 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ARHGEF39Q8N4T4 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ARHGEF39Q8N4T4 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
ARHGEF39Q8N4T4 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
ARHGEF39Q8N4T4 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ARHGEF39Q8N4T4 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
ARHGEF39Q8N4T4 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
ARHGEF39Q8N4T4 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
ARHGEF39Q8N4T4 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.09■□□□□ 0.65
ARHGEF39Q8N4T4 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ARHGEF39Q8N4T4 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.09■□□□□ 0.65
ARHGEF39Q8N4T4 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
ARHGEF39Q8N4T4 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
ARHGEF39Q8N4T4 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
ARHGEF39Q8N4T4 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ARHGEF39Q8N4T4 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ARHGEF39Q8N4T4 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.09■□□□□ 0.65
ARHGEF39Q8N4T4 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
ARHGEF39Q8N4T4 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.09■□□□□ 0.65
ARHGEF39Q8N4T4 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.09■□□□□ 0.65
ARHGEF39Q8N4T4 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.09■□□□□ 0.65
ARHGEF39Q8N4T4 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ARHGEF39Q8N4T4 SOX15-203ENST00000570788 1093 ntBASIC19.09■□□□□ 0.65
ARHGEF39Q8N4T4 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ARHGEF39Q8N4T4 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.09■□□□□ 0.65
ARHGEF39Q8N4T4 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ARHGEF39Q8N4T4 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.09■□□□□ 0.65
ARHGEF39Q8N4T4 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.09■□□□□ 0.65
ARHGEF39Q8N4T4 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.09■□□□□ 0.65
ARHGEF39Q8N4T4 AC073314.1-201ENST00000568729 2216 ntBASIC19.08■□□□□ 0.65
ARHGEF39Q8N4T4 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
ARHGEF39Q8N4T4 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.08■□□□□ 0.65
ARHGEF39Q8N4T4 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ARHGEF39Q8N4T4 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ARHGEF39Q8N4T4 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ARHGEF39Q8N4T4 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ARHGEF39Q8N4T4 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
ARHGEF39Q8N4T4 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.08■□□□□ 0.64
ARHGEF39Q8N4T4 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.08■□□□□ 0.64
ARHGEF39Q8N4T4 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
ARHGEF39Q8N4T4 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ARHGEF39Q8N4T4 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ARHGEF39Q8N4T4 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ARHGEF39Q8N4T4 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.08■□□□□ 0.64
ARHGEF39Q8N4T4 AP005212.1-201ENST00000581547 1997 ntBASIC19.08■□□□□ 0.64
ARHGEF39Q8N4T4 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
ARHGEF39Q8N4T4 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms