Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC01561Q8N1V8 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC13.56□□□□□ -0.24
LINC01561Q8N1V8 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC13.56□□□□□ -0.24
LINC01561Q8N1V8 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC13.56□□□□□ -0.24
LINC01561Q8N1V8 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC13.56□□□□□ -0.24
LINC01561Q8N1V8 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC01561Q8N1V8 AC008406.3-201ENST00000620001 1374 ntBASIC13.56□□□□□ -0.24
LINC01561Q8N1V8 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC01561Q8N1V8 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC01561Q8N1V8 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LINC01561Q8N1V8 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC13.56□□□□□ -0.24
LINC01561Q8N1V8 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LINC01561Q8N1V8 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC01561Q8N1V8 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC13.56□□□□□ -0.24
LINC01561Q8N1V8 AC026471.1-201ENST00000564629 3026 ntBASIC13.56□□□□□ -0.24
LINC01561Q8N1V8 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC01561Q8N1V8 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC01561Q8N1V8 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
LINC01561Q8N1V8 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC01561Q8N1V8 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LINC01561Q8N1V8 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LINC01561Q8N1V8 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC01561Q8N1V8 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC01561Q8N1V8 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC13.55□□□□□ -0.24
LINC01561Q8N1V8 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
LINC01561Q8N1V8 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC01561Q8N1V8 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
LINC01561Q8N1V8 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC01561Q8N1V8 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
LINC01561Q8N1V8 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC01561Q8N1V8 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC13.55□□□□□ -0.24
LINC01561Q8N1V8 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC13.55□□□□□ -0.24
LINC01561Q8N1V8 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC01561Q8N1V8 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LINC01561Q8N1V8 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC01561Q8N1V8 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC01561Q8N1V8 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC13.55□□□□□ -0.24
LINC01561Q8N1V8 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC13.55□□□□□ -0.24
LINC01561Q8N1V8 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC01561Q8N1V8 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC01561Q8N1V8 AC097381.1-201ENST00000429019 1296 ntBASIC13.55□□□□□ -0.24
LINC01561Q8N1V8 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC13.55□□□□□ -0.24
LINC01561Q8N1V8 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC13.55□□□□□ -0.24
LINC01561Q8N1V8 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC13.55□□□□□ -0.24
LINC01561Q8N1V8 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC01561Q8N1V8 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LINC01561Q8N1V8 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
LINC01561Q8N1V8 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC13.55□□□□□ -0.24
LINC01561Q8N1V8 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LINC01561Q8N1V8 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC01561Q8N1V8 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
LINC01561Q8N1V8 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC01561Q8N1V8 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
LINC01561Q8N1V8 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC01561Q8N1V8 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC01561Q8N1V8 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC13.55□□□□□ -0.24
LINC01561Q8N1V8 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC13.55□□□□□ -0.24
LINC01561Q8N1V8 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC01561Q8N1V8 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LINC01561Q8N1V8 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LINC01561Q8N1V8 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC13.54□□□□□ -0.24
LINC01561Q8N1V8 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC01561Q8N1V8 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LINC01561Q8N1V8 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC13.54□□□□□ -0.24
LINC01561Q8N1V8 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
LINC01561Q8N1V8 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC13.54□□□□□ -0.24
LINC01561Q8N1V8 DPP3P2-201ENST00000416030 1696 ntBASIC13.54□□□□□ -0.24
LINC01561Q8N1V8 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC13.54□□□□□ -0.24
LINC01561Q8N1V8 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC13.54□□□□□ -0.24
LINC01561Q8N1V8 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC01561Q8N1V8 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
LINC01561Q8N1V8 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC01561Q8N1V8 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC01561Q8N1V8 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC01561Q8N1V8 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC01561Q8N1V8 NME4-202ENST00000382940 766 ntTSL 3 BASIC13.54□□□□□ -0.24
LINC01561Q8N1V8 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LINC01561Q8N1V8 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
LINC01561Q8N1V8 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC13.54□□□□□ -0.24
LINC01561Q8N1V8 AC105265.2-201ENST00000467189 838 ntBASIC13.54□□□□□ -0.24
LINC01561Q8N1V8 NME4-211ENST00000620944 1193 ntTSL 2 BASIC13.54□□□□□ -0.24
LINC01561Q8N1V8 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC01561Q8N1V8 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC13.54□□□□□ -0.24
LINC01561Q8N1V8 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC01561Q8N1V8 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC01561Q8N1V8 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LINC01561Q8N1V8 AC018445.3-201ENST00000624177 1945 ntBASIC13.54□□□□□ -0.24
LINC01561Q8N1V8 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC13.54□□□□□ -0.24
LINC01561Q8N1V8 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC13.54□□□□□ -0.24
LINC01561Q8N1V8 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
LINC01561Q8N1V8 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC13.54□□□□□ -0.24
LINC01561Q8N1V8 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
LINC01561Q8N1V8 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
LINC01561Q8N1V8 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01561Q8N1V8 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC13.53□□□□□ -0.24
LINC01561Q8N1V8 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01561Q8N1V8 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01561Q8N1V8 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01561Q8N1V8 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01561Q8N1V8 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms