Protein–RNA interactions for Protein: Q8N187

CARF, Calcium-responsive transcription factor, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CARFQ8N187 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.25■□□□□ 0.67
CARFQ8N187 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CARFQ8N187 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CARFQ8N187 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CARFQ8N187 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CARFQ8N187 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CARFQ8N187 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CARFQ8N187 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CARFQ8N187 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CARFQ8N187 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CARFQ8N187 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CARFQ8N187 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.24■□□□□ 0.67
CARFQ8N187 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CARFQ8N187 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.24■□□□□ 0.67
CARFQ8N187 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.24■□□□□ 0.67
CARFQ8N187 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CARFQ8N187 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.24■□□□□ 0.67
CARFQ8N187 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.24■□□□□ 0.67
CARFQ8N187 PRKY-204ENST00000533551 1019 ntBASIC19.24■□□□□ 0.67
CARFQ8N187 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.24■□□□□ 0.67
CARFQ8N187 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.24■□□□□ 0.67
CARFQ8N187 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CARFQ8N187 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.24■□□□□ 0.67
CARFQ8N187 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CARFQ8N187 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CARFQ8N187 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CARFQ8N187 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CARFQ8N187 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CARFQ8N187 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.23■□□□□ 0.67
CARFQ8N187 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CARFQ8N187 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.23■□□□□ 0.67
CARFQ8N187 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CARFQ8N187 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CARFQ8N187 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.23■□□□□ 0.67
CARFQ8N187 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CARFQ8N187 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CARFQ8N187 MIR718-201ENST00000390190 70 ntBASIC19.23■□□□□ 0.67
CARFQ8N187 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.23■□□□□ 0.67
CARFQ8N187 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.23■□□□□ 0.67
CARFQ8N187 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.23■□□□□ 0.67
CARFQ8N187 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
CARFQ8N187 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.23■□□□□ 0.67
CARFQ8N187 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CARFQ8N187 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CARFQ8N187 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CARFQ8N187 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CARFQ8N187 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CARFQ8N187 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CARFQ8N187 AC007225.1-201ENST00000566331 1836 ntBASIC19.23■□□□□ 0.67
CARFQ8N187 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.23■□□□□ 0.67
CARFQ8N187 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CARFQ8N187 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CARFQ8N187 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CARFQ8N187 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
CARFQ8N187 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.22■□□□□ 0.67
CARFQ8N187 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CARFQ8N187 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CARFQ8N187 AC239809.2-201ENST00000415381 517 ntBASIC19.22■□□□□ 0.67
CARFQ8N187 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CARFQ8N187 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.22■□□□□ 0.67
CARFQ8N187 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.22■□□□□ 0.67
CARFQ8N187 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.22■□□□□ 0.67
CARFQ8N187 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.22■□□□□ 0.67
CARFQ8N187 AL121906.2-201ENST00000621597 723 ntBASIC19.22■□□□□ 0.67
CARFQ8N187 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CARFQ8N187 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.22■□□□□ 0.67
CARFQ8N187 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CARFQ8N187 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
CARFQ8N187 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CARFQ8N187 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CARFQ8N187 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CARFQ8N187 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.21■□□□□ 0.67
CARFQ8N187 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.21■□□□□ 0.67
CARFQ8N187 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CARFQ8N187 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CARFQ8N187 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CARFQ8N187 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CARFQ8N187 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CARFQ8N187 AL121603.2-201ENST00000557373 2117 ntBASIC19.21■□□□□ 0.67
CARFQ8N187 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CARFQ8N187 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CARFQ8N187 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CARFQ8N187 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CARFQ8N187 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CARFQ8N187 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CARFQ8N187 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
CARFQ8N187 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CARFQ8N187 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.21■□□□□ 0.67
CARFQ8N187 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CARFQ8N187 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.21■□□□□ 0.67
CARFQ8N187 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
CARFQ8N187 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CARFQ8N187 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CARFQ8N187 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.21■□□□□ 0.67
CARFQ8N187 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
CARFQ8N187 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.21■□□□□ 0.67
CARFQ8N187 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CARFQ8N187 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.21■□□□□ 0.67
CARFQ8N187 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.21■□□□□ 0.67
CARFQ8N187 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms