Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
C9orf40Q8IXQ3 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
C9orf40Q8IXQ3 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.68■□□□□ 0.58
C9orf40Q8IXQ3 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.68■□□□□ 0.58
C9orf40Q8IXQ3 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
C9orf40Q8IXQ3 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.68■□□□□ 0.58
C9orf40Q8IXQ3 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.68■□□□□ 0.58
C9orf40Q8IXQ3 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
C9orf40Q8IXQ3 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
C9orf40Q8IXQ3 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
C9orf40Q8IXQ3 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
C9orf40Q8IXQ3 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
C9orf40Q8IXQ3 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
C9orf40Q8IXQ3 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
C9orf40Q8IXQ3 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.68■□□□□ 0.58
C9orf40Q8IXQ3 AP005212.1-201ENST00000581547 1997 ntBASIC18.68■□□□□ 0.58
C9orf40Q8IXQ3 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.68■□□□□ 0.58
C9orf40Q8IXQ3 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
C9orf40Q8IXQ3 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
C9orf40Q8IXQ3 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
C9orf40Q8IXQ3 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.67■□□□□ 0.58
C9orf40Q8IXQ3 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.67■□□□□ 0.58
C9orf40Q8IXQ3 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
C9orf40Q8IXQ3 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
C9orf40Q8IXQ3 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
C9orf40Q8IXQ3 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
C9orf40Q8IXQ3 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
C9orf40Q8IXQ3 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
C9orf40Q8IXQ3 AC020907.5-201ENST00000624372 1936 ntBASIC18.67■□□□□ 0.58
C9orf40Q8IXQ3 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
C9orf40Q8IXQ3 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
C9orf40Q8IXQ3 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
C9orf40Q8IXQ3 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.67■□□□□ 0.58
C9orf40Q8IXQ3 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
C9orf40Q8IXQ3 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.67■□□□□ 0.58
C9orf40Q8IXQ3 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.67■□□□□ 0.58
C9orf40Q8IXQ3 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
C9orf40Q8IXQ3 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.67■□□□□ 0.58
C9orf40Q8IXQ3 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.67■□□□□ 0.58
C9orf40Q8IXQ3 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
C9orf40Q8IXQ3 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
C9orf40Q8IXQ3 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
C9orf40Q8IXQ3 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.67■□□□□ 0.58
C9orf40Q8IXQ3 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.67■□□□□ 0.58
C9orf40Q8IXQ3 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
C9orf40Q8IXQ3 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.67■□□□□ 0.58
C9orf40Q8IXQ3 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
C9orf40Q8IXQ3 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.67■□□□□ 0.58
C9orf40Q8IXQ3 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
C9orf40Q8IXQ3 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
C9orf40Q8IXQ3 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
C9orf40Q8IXQ3 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.66■□□□□ 0.58
C9orf40Q8IXQ3 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
C9orf40Q8IXQ3 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
C9orf40Q8IXQ3 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
C9orf40Q8IXQ3 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.66■□□□□ 0.58
C9orf40Q8IXQ3 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
C9orf40Q8IXQ3 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
C9orf40Q8IXQ3 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.66■□□□□ 0.58
C9orf40Q8IXQ3 UNC93B5-201ENST00000530315 699 ntBASIC18.66■□□□□ 0.58
C9orf40Q8IXQ3 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.66■□□□□ 0.58
C9orf40Q8IXQ3 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
C9orf40Q8IXQ3 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.66■□□□□ 0.58
C9orf40Q8IXQ3 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
C9orf40Q8IXQ3 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
C9orf40Q8IXQ3 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
C9orf40Q8IXQ3 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.66■□□□□ 0.58
C9orf40Q8IXQ3 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
C9orf40Q8IXQ3 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.66■□□□□ 0.58
C9orf40Q8IXQ3 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
C9orf40Q8IXQ3 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.65■□□□□ 0.58
C9orf40Q8IXQ3 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.65■□□□□ 0.58
C9orf40Q8IXQ3 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
C9orf40Q8IXQ3 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
C9orf40Q8IXQ3 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.65■□□□□ 0.58
C9orf40Q8IXQ3 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
C9orf40Q8IXQ3 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.65■□□□□ 0.58
C9orf40Q8IXQ3 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.65■□□□□ 0.58
C9orf40Q8IXQ3 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
C9orf40Q8IXQ3 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
C9orf40Q8IXQ3 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
C9orf40Q8IXQ3 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
C9orf40Q8IXQ3 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
C9orf40Q8IXQ3 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.65■□□□□ 0.58
C9orf40Q8IXQ3 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
C9orf40Q8IXQ3 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
C9orf40Q8IXQ3 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
C9orf40Q8IXQ3 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
C9orf40Q8IXQ3 SMG8-203ENST00000578922 2178 ntBASIC18.64■□□□□ 0.57
C9orf40Q8IXQ3 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
C9orf40Q8IXQ3 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
C9orf40Q8IXQ3 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
C9orf40Q8IXQ3 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
C9orf40Q8IXQ3 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
C9orf40Q8IXQ3 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
C9orf40Q8IXQ3 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
C9orf40Q8IXQ3 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.64■□□□□ 0.57
C9orf40Q8IXQ3 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.64■□□□□ 0.57
C9orf40Q8IXQ3 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.64■□□□□ 0.57
C9orf40Q8IXQ3 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms