Protein–RNA interactions for Protein: Q86WB0

ZC3HC1, Nuclear-interacting partner of ALK, humanhuman

Known RBP Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1Q86WB0 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ZC3HC1Q86WB0 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
ZC3HC1Q86WB0 AC007322.4-201ENST00000509611 723 ntBASIC20.1■□□□□ 0.81
ZC3HC1Q86WB0 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
ZC3HC1Q86WB0 AC013268.1-206ENST00000638368 961 ntBASIC20.1■□□□□ 0.81
ZC3HC1Q86WB0 AC112229.1-201ENST00000639295 961 ntBASIC20.1■□□□□ 0.81
ZC3HC1Q86WB0 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.1■□□□□ 0.81
ZC3HC1Q86WB0 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZC3HC1Q86WB0 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.1■□□□□ 0.81
ZC3HC1Q86WB0 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.1■□□□□ 0.81
ZC3HC1Q86WB0 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZC3HC1Q86WB0 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZC3HC1Q86WB0 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.1■□□□□ 0.81
ZC3HC1Q86WB0 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ZC3HC1Q86WB0 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
ZC3HC1Q86WB0 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ZC3HC1Q86WB0 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.09■□□□□ 0.81
ZC3HC1Q86WB0 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.09■□□□□ 0.81
ZC3HC1Q86WB0 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
ZC3HC1Q86WB0 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
ZC3HC1Q86WB0 BX119927.1-201ENST00000636596 1552 ntBASIC20.09■□□□□ 0.81
ZC3HC1Q86WB0 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ZC3HC1Q86WB0 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ZC3HC1Q86WB0 AL691432.2-201ENST00000607222 2038 ntBASIC20.09■□□□□ 0.81
ZC3HC1Q86WB0 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.09■□□□□ 0.81
ZC3HC1Q86WB0 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ZC3HC1Q86WB0 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.09■□□□□ 0.81
ZC3HC1Q86WB0 KRT18P11-201ENST00000435214 1283 ntBASIC20.09■□□□□ 0.81
ZC3HC1Q86WB0 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.09■□□□□ 0.81
ZC3HC1Q86WB0 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.09■□□□□ 0.81
ZC3HC1Q86WB0 AC016405.3-201ENST00000607710 860 ntBASIC20.09■□□□□ 0.81
ZC3HC1Q86WB0 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ZC3HC1Q86WB0 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ZC3HC1Q86WB0 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
ZC3HC1Q86WB0 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
ZC3HC1Q86WB0 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.09■□□□□ 0.81
ZC3HC1Q86WB0 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ZC3HC1Q86WB0 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.09■□□□□ 0.81
ZC3HC1Q86WB0 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
ZC3HC1Q86WB0 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.09■□□□□ 0.81
ZC3HC1Q86WB0 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
ZC3HC1Q86WB0 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ZC3HC1Q86WB0 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.08■□□□□ 0.81
ZC3HC1Q86WB0 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
ZC3HC1Q86WB0 AC125437.2-201ENST00000625180 2167 ntBASIC20.08■□□□□ 0.81
ZC3HC1Q86WB0 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
ZC3HC1Q86WB0 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
ZC3HC1Q86WB0 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
ZC3HC1Q86WB0 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
ZC3HC1Q86WB0 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.08■□□□□ 0.81
ZC3HC1Q86WB0 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.08■□□□□ 0.81
ZC3HC1Q86WB0 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.08■□□□□ 0.81
ZC3HC1Q86WB0 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.08■□□□□ 0.81
ZC3HC1Q86WB0 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.08■□□□□ 0.8
ZC3HC1Q86WB0 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.08■□□□□ 0.8
ZC3HC1Q86WB0 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
ZC3HC1Q86WB0 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ZC3HC1Q86WB0 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.08■□□□□ 0.8
ZC3HC1Q86WB0 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ZC3HC1Q86WB0 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ZC3HC1Q86WB0 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
ZC3HC1Q86WB0 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.07■□□□□ 0.8
ZC3HC1Q86WB0 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZC3HC1Q86WB0 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZC3HC1Q86WB0 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ZC3HC1Q86WB0 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
ZC3HC1Q86WB0 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZC3HC1Q86WB0 KRT18P5-201ENST00000436075 1291 ntBASIC20.07■□□□□ 0.8
ZC3HC1Q86WB0 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.07■□□□□ 0.8
ZC3HC1Q86WB0 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.07■□□□□ 0.8
ZC3HC1Q86WB0 MFSD11-216ENST00000590393 1141 ntBASIC20.07■□□□□ 0.8
ZC3HC1Q86WB0 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.07■□□□□ 0.8
ZC3HC1Q86WB0 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZC3HC1Q86WB0 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZC3HC1Q86WB0 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
ZC3HC1Q86WB0 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZC3HC1Q86WB0 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
ZC3HC1Q86WB0 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.07■□□□□ 0.8
ZC3HC1Q86WB0 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZC3HC1Q86WB0 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.06■□□□□ 0.8
ZC3HC1Q86WB0 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ZC3HC1Q86WB0 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
ZC3HC1Q86WB0 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZC3HC1Q86WB0 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.06■□□□□ 0.8
ZC3HC1Q86WB0 AC007952.6-201ENST00000573168 2673 ntBASIC20.06■□□□□ 0.8
ZC3HC1Q86WB0 AC003957.1-201ENST00000625108 2673 ntBASIC20.06■□□□□ 0.8
ZC3HC1Q86WB0 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZC3HC1Q86WB0 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZC3HC1Q86WB0 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZC3HC1Q86WB0 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
ZC3HC1Q86WB0 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.06■□□□□ 0.8
ZC3HC1Q86WB0 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.06■□□□□ 0.8
ZC3HC1Q86WB0 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.06■□□□□ 0.8
ZC3HC1Q86WB0 AC137761.2-201ENST00000561729 223 ntBASIC20.06■□□□□ 0.8
ZC3HC1Q86WB0 AC145350.3-201ENST00000569033 163 ntBASIC20.06■□□□□ 0.8
ZC3HC1Q86WB0 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.06■□□□□ 0.8
ZC3HC1Q86WB0 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.06■□□□□ 0.8
ZC3HC1Q86WB0 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.06■□□□□ 0.8
ZC3HC1Q86WB0 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZC3HC1Q86WB0 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms