Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
VPS13BQ7Z7G8 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
VPS13BQ7Z7G8 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
VPS13BQ7Z7G8 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
VPS13BQ7Z7G8 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
VPS13BQ7Z7G8 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
VPS13BQ7Z7G8 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VPS13BQ7Z7G8 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC12.57□□□□□ -0.4
VPS13BQ7Z7G8 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
VPS13BQ7Z7G8 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VPS13BQ7Z7G8 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
VPS13BQ7Z7G8 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC12.57□□□□□ -0.4
VPS13BQ7Z7G8 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC12.57□□□□□ -0.4
VPS13BQ7Z7G8 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC12.57□□□□□ -0.4
VPS13BQ7Z7G8 AC006557.6-201ENST00000623071 864 ntBASIC12.57□□□□□ -0.4
VPS13BQ7Z7G8 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
VPS13BQ7Z7G8 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
VPS13BQ7Z7G8 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VPS13BQ7Z7G8 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC12.57□□□□□ -0.4
VPS13BQ7Z7G8 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VPS13BQ7Z7G8 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
VPS13BQ7Z7G8 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC12.57□□□□□ -0.4
VPS13BQ7Z7G8 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC12.57□□□□□ -0.4
VPS13BQ7Z7G8 METTL23-204ENST00000586752 904 ntTSL 2 BASIC12.57□□□□□ -0.4
VPS13BQ7Z7G8 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC12.57□□□□□ -0.4
VPS13BQ7Z7G8 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC12.57□□□□□ -0.4
VPS13BQ7Z7G8 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VPS13BQ7Z7G8 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
VPS13BQ7Z7G8 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC12.57□□□□□ -0.4
VPS13BQ7Z7G8 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VPS13BQ7Z7G8 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VPS13BQ7Z7G8 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VPS13BQ7Z7G8 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC12.56□□□□□ -0.4
VPS13BQ7Z7G8 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VPS13BQ7Z7G8 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VPS13BQ7Z7G8 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VPS13BQ7Z7G8 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VPS13BQ7Z7G8 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VPS13BQ7Z7G8 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC12.56□□□□□ -0.4
VPS13BQ7Z7G8 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
VPS13BQ7Z7G8 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VPS13BQ7Z7G8 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC12.56□□□□□ -0.4
VPS13BQ7Z7G8 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VPS13BQ7Z7G8 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC12.56□□□□□ -0.4
VPS13BQ7Z7G8 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC12.56□□□□□ -0.4
VPS13BQ7Z7G8 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VPS13BQ7Z7G8 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
VPS13BQ7Z7G8 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VPS13BQ7Z7G8 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC12.56□□□□□ -0.4
VPS13BQ7Z7G8 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC12.56□□□□□ -0.4
VPS13BQ7Z7G8 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VPS13BQ7Z7G8 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
VPS13BQ7Z7G8 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC12.56□□□□□ -0.4
VPS13BQ7Z7G8 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC12.56□□□□□ -0.4
VPS13BQ7Z7G8 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
VPS13BQ7Z7G8 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC12.56□□□□□ -0.4
VPS13BQ7Z7G8 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VPS13BQ7Z7G8 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
VPS13BQ7Z7G8 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VPS13BQ7Z7G8 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
VPS13BQ7Z7G8 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC12.55□□□□□ -0.4
VPS13BQ7Z7G8 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
VPS13BQ7Z7G8 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC12.55□□□□□ -0.4
VPS13BQ7Z7G8 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
VPS13BQ7Z7G8 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
VPS13BQ7Z7G8 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
VPS13BQ7Z7G8 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC12.55□□□□□ -0.4
VPS13BQ7Z7G8 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC12.55□□□□□ -0.4
VPS13BQ7Z7G8 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VPS13BQ7Z7G8 AL137013.1-201ENST00000432946 1228 ntBASIC12.55□□□□□ -0.4
VPS13BQ7Z7G8 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC12.55□□□□□ -0.4
VPS13BQ7Z7G8 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
VPS13BQ7Z7G8 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VPS13BQ7Z7G8 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC12.55□□□□□ -0.4
VPS13BQ7Z7G8 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC12.55□□□□□ -0.4
VPS13BQ7Z7G8 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
VPS13BQ7Z7G8 AL353807.1-201ENST00000427475 662 ntBASIC12.55□□□□□ -0.4
VPS13BQ7Z7G8 FITM1-202ENST00000559294 800 ntBASIC12.55□□□□□ -0.4
VPS13BQ7Z7G8 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC12.55□□□□□ -0.4
VPS13BQ7Z7G8 MYC-208ENST00000641036 567 ntBASIC12.55□□□□□ -0.4
VPS13BQ7Z7G8 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VPS13BQ7Z7G8 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
VPS13BQ7Z7G8 STK25-205ENST00000405883 1904 ntTSL 2 BASIC12.54□□□□□ -0.4
VPS13BQ7Z7G8 DUX4L26-201ENST00000489078 1255 ntBASIC12.54□□□□□ -0.4
VPS13BQ7Z7G8 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC12.54□□□□□ -0.4
VPS13BQ7Z7G8 AC005363.2-201ENST00000618631 242 ntBASIC12.54□□□□□ -0.4
VPS13BQ7Z7G8 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
VPS13BQ7Z7G8 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
VPS13BQ7Z7G8 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VPS13BQ7Z7G8 CYP21A1P-202ENST00000354927 1481 ntBASIC12.54□□□□□ -0.4
VPS13BQ7Z7G8 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VPS13BQ7Z7G8 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
VPS13BQ7Z7G8 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
VPS13BQ7Z7G8 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC12.54□□□□□ -0.4
VPS13BQ7Z7G8 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
VPS13BQ7Z7G8 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VPS13BQ7Z7G8 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VPS13BQ7Z7G8 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VPS13BQ7Z7G8 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC12.54□□□□□ -0.4
VPS13BQ7Z7G8 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms