Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTCHD4Q6ZW05 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.55■□□□□ 0.56
PTCHD4Q6ZW05 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PTCHD4Q6ZW05 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTCHD4Q6ZW05 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
PTCHD4Q6ZW05 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.54■□□□□ 0.56
PTCHD4Q6ZW05 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PTCHD4Q6ZW05 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PTCHD4Q6ZW05 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.54■□□□□ 0.56
PTCHD4Q6ZW05 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.54■□□□□ 0.56
PTCHD4Q6ZW05 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.54■□□□□ 0.56
PTCHD4Q6ZW05 KRT87P-202ENST00000534226 1464 ntBASIC18.54■□□□□ 0.56
PTCHD4Q6ZW05 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
PTCHD4Q6ZW05 IRS3P-201ENST00000223076 1006 ntBASIC18.54■□□□□ 0.56
PTCHD4Q6ZW05 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTCHD4Q6ZW05 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.54■□□□□ 0.56
PTCHD4Q6ZW05 AC079140.4-201ENST00000507448 529 ntBASIC18.54■□□□□ 0.56
PTCHD4Q6ZW05 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.54■□□□□ 0.56
PTCHD4Q6ZW05 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTCHD4Q6ZW05 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PTCHD4Q6ZW05 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
PTCHD4Q6ZW05 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
PTCHD4Q6ZW05 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTCHD4Q6ZW05 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTCHD4Q6ZW05 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
PTCHD4Q6ZW05 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTCHD4Q6ZW05 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTCHD4Q6ZW05 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTCHD4Q6ZW05 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.54■□□□□ 0.56
PTCHD4Q6ZW05 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PTCHD4Q6ZW05 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.53■□□□□ 0.56
PTCHD4Q6ZW05 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.53■□□□□ 0.56
PTCHD4Q6ZW05 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PTCHD4Q6ZW05 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PTCHD4Q6ZW05 BX323043.1-201ENST00000641006 1765 ntBASIC18.53■□□□□ 0.56
PTCHD4Q6ZW05 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PTCHD4Q6ZW05 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
PTCHD4Q6ZW05 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
PTCHD4Q6ZW05 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.53■□□□□ 0.56
PTCHD4Q6ZW05 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
PTCHD4Q6ZW05 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.53■□□□□ 0.56
PTCHD4Q6ZW05 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
PTCHD4Q6ZW05 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
PTCHD4Q6ZW05 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PTCHD4Q6ZW05 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PTCHD4Q6ZW05 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.56
PTCHD4Q6ZW05 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PTCHD4Q6ZW05 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
PTCHD4Q6ZW05 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PTCHD4Q6ZW05 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PTCHD4Q6ZW05 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PTCHD4Q6ZW05 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PTCHD4Q6ZW05 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PTCHD4Q6ZW05 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
PTCHD4Q6ZW05 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PTCHD4Q6ZW05 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.55
PTCHD4Q6ZW05 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PTCHD4Q6ZW05 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
PTCHD4Q6ZW05 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PTCHD4Q6ZW05 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PTCHD4Q6ZW05 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTCHD4Q6ZW05 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTCHD4Q6ZW05 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.51■□□□□ 0.55
PTCHD4Q6ZW05 AL158211.5-201ENST00000623583 2518 ntBASIC18.51■□□□□ 0.55
PTCHD4Q6ZW05 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.51■□□□□ 0.55
PTCHD4Q6ZW05 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTCHD4Q6ZW05 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
PTCHD4Q6ZW05 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTCHD4Q6ZW05 AC027612.3-201ENST00000413684 1047 ntBASIC18.51■□□□□ 0.55
PTCHD4Q6ZW05 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PTCHD4Q6ZW05 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.51■□□□□ 0.55
PTCHD4Q6ZW05 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.51■□□□□ 0.55
PTCHD4Q6ZW05 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PTCHD4Q6ZW05 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTCHD4Q6ZW05 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTCHD4Q6ZW05 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
PTCHD4Q6ZW05 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PTCHD4Q6ZW05 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTCHD4Q6ZW05 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTCHD4Q6ZW05 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PTCHD4Q6ZW05 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTCHD4Q6ZW05 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTCHD4Q6ZW05 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTCHD4Q6ZW05 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTCHD4Q6ZW05 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
PTCHD4Q6ZW05 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PTCHD4Q6ZW05 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTCHD4Q6ZW05 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTCHD4Q6ZW05 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTCHD4Q6ZW05 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PTCHD4Q6ZW05 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTCHD4Q6ZW05 AC125437.2-201ENST00000625180 2167 ntBASIC18.5■□□□□ 0.55
PTCHD4Q6ZW05 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTCHD4Q6ZW05 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTCHD4Q6ZW05 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
PTCHD4Q6ZW05 MIR638-201ENST00000385237 100 ntBASIC18.5■□□□□ 0.55
PTCHD4Q6ZW05 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PTCHD4Q6ZW05 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.5■□□□□ 0.55
PTCHD4Q6ZW05 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.5■□□□□ 0.55
PTCHD4Q6ZW05 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms