Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PACS1Q6VY07 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PACS1Q6VY07 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PACS1Q6VY07 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.41■□□□□ 0.86
PACS1Q6VY07 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
PACS1Q6VY07 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PACS1Q6VY07 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.4■□□□□ 0.86
PACS1Q6VY07 AC007322.3-201ENST00000426526 701 ntBASIC20.4■□□□□ 0.86
PACS1Q6VY07 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
PACS1Q6VY07 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PACS1Q6VY07 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.4■□□□□ 0.86
PACS1Q6VY07 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.4■□□□□ 0.86
PACS1Q6VY07 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PACS1Q6VY07 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
PACS1Q6VY07 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
PACS1Q6VY07 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PACS1Q6VY07 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
PACS1Q6VY07 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PACS1Q6VY07 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
PACS1Q6VY07 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PACS1Q6VY07 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
PACS1Q6VY07 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
PACS1Q6VY07 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PACS1Q6VY07 AC007952.6-201ENST00000573168 2673 ntBASIC20.39■□□□□ 0.85
PACS1Q6VY07 AC003957.1-201ENST00000625108 2673 ntBASIC20.39■□□□□ 0.85
PACS1Q6VY07 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PACS1Q6VY07 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PACS1Q6VY07 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PACS1Q6VY07 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.39■□□□□ 0.85
PACS1Q6VY07 CDV3P1-201ENST00000471403 739 ntBASIC20.39■□□□□ 0.85
PACS1Q6VY07 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.39■□□□□ 0.85
PACS1Q6VY07 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.39■□□□□ 0.85
PACS1Q6VY07 AL591742.1-201ENST00000604433 565 ntBASIC20.39■□□□□ 0.85
PACS1Q6VY07 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.39■□□□□ 0.85
PACS1Q6VY07 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.39■□□□□ 0.85
PACS1Q6VY07 SMG8-203ENST00000578922 2178 ntBASIC20.39■□□□□ 0.85
PACS1Q6VY07 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PACS1Q6VY07 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.39■□□□□ 0.85
PACS1Q6VY07 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PACS1Q6VY07 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PACS1Q6VY07 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.39■□□□□ 0.85
PACS1Q6VY07 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.39■□□□□ 0.85
PACS1Q6VY07 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PACS1Q6VY07 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PACS1Q6VY07 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PACS1Q6VY07 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PACS1Q6VY07 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PACS1Q6VY07 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PACS1Q6VY07 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.38■□□□□ 0.85
PACS1Q6VY07 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
PACS1Q6VY07 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PACS1Q6VY07 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.38■□□□□ 0.85
PACS1Q6VY07 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PACS1Q6VY07 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
PACS1Q6VY07 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PACS1Q6VY07 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.38■□□□□ 0.85
PACS1Q6VY07 AL137784.2-201ENST00000607332 1000 ntBASIC20.38■□□□□ 0.85
PACS1Q6VY07 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PACS1Q6VY07 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.38■□□□□ 0.85
PACS1Q6VY07 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.38■□□□□ 0.85
PACS1Q6VY07 AC231657.2-201ENST00000624556 255 ntBASIC20.38■□□□□ 0.85
PACS1Q6VY07 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
PACS1Q6VY07 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PACS1Q6VY07 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
PACS1Q6VY07 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PACS1Q6VY07 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PACS1Q6VY07 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PACS1Q6VY07 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PACS1Q6VY07 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
PACS1Q6VY07 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PACS1Q6VY07 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.37■□□□□ 0.85
PACS1Q6VY07 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PACS1Q6VY07 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PACS1Q6VY07 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PACS1Q6VY07 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.37■□□□□ 0.85
PACS1Q6VY07 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
PACS1Q6VY07 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.37■□□□□ 0.85
PACS1Q6VY07 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PACS1Q6VY07 FAM21FP-204ENST00000608637 956 ntBASIC20.37■□□□□ 0.85
PACS1Q6VY07 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
PACS1Q6VY07 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PACS1Q6VY07 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
PACS1Q6VY07 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PACS1Q6VY07 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
PACS1Q6VY07 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
PACS1Q6VY07 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PACS1Q6VY07 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.36■□□□□ 0.85
PACS1Q6VY07 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.36■□□□□ 0.85
PACS1Q6VY07 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.36■□□□□ 0.85
PACS1Q6VY07 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.36■□□□□ 0.85
PACS1Q6VY07 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PACS1Q6VY07 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PACS1Q6VY07 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
PACS1Q6VY07 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.36■□□□□ 0.85
PACS1Q6VY07 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.36■□□□□ 0.85
PACS1Q6VY07 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.36■□□□□ 0.85
PACS1Q6VY07 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PACS1Q6VY07 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PACS1Q6VY07 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
PACS1Q6VY07 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms