Protein–RNA interactions for Protein: Q5VTA0

PRAMEF17, PRAME family member 17, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF17Q5VTA0 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRAMEF17Q5VTA0 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
PRAMEF17Q5VTA0 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
PRAMEF17Q5VTA0 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.28■□□□□ 0.68
PRAMEF17Q5VTA0 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRAMEF17Q5VTA0 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.28■□□□□ 0.68
PRAMEF17Q5VTA0 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRAMEF17Q5VTA0 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.28■□□□□ 0.68
PRAMEF17Q5VTA0 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRAMEF17Q5VTA0 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
PRAMEF17Q5VTA0 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.28■□□□□ 0.68
PRAMEF17Q5VTA0 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRAMEF17Q5VTA0 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PRAMEF17Q5VTA0 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.28■□□□□ 0.68
PRAMEF17Q5VTA0 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRAMEF17Q5VTA0 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRAMEF17Q5VTA0 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.28■□□□□ 0.68
PRAMEF17Q5VTA0 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRAMEF17Q5VTA0 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRAMEF17Q5VTA0 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRAMEF17Q5VTA0 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
PRAMEF17Q5VTA0 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PRAMEF17Q5VTA0 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PRAMEF17Q5VTA0 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PRAMEF17Q5VTA0 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PRAMEF17Q5VTA0 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PRAMEF17Q5VTA0 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PRAMEF17Q5VTA0 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PRAMEF17Q5VTA0 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.27■□□□□ 0.68
PRAMEF17Q5VTA0 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PRAMEF17Q5VTA0 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PRAMEF17Q5VTA0 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PRAMEF17Q5VTA0 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
PRAMEF17Q5VTA0 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.27■□□□□ 0.68
PRAMEF17Q5VTA0 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PRAMEF17Q5VTA0 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.27■□□□□ 0.68
PRAMEF17Q5VTA0 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.27■□□□□ 0.68
PRAMEF17Q5VTA0 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
PRAMEF17Q5VTA0 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PRAMEF17Q5VTA0 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PRAMEF17Q5VTA0 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PRAMEF17Q5VTA0 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.27■□□□□ 0.68
PRAMEF17Q5VTA0 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.27■□□□□ 0.68
PRAMEF17Q5VTA0 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
PRAMEF17Q5VTA0 AC005229.4-201ENST00000610085 2198 ntBASIC19.27■□□□□ 0.68
PRAMEF17Q5VTA0 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PRAMEF17Q5VTA0 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PRAMEF17Q5VTA0 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PRAMEF17Q5VTA0 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.27■□□□□ 0.67
PRAMEF17Q5VTA0 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.26■□□□□ 0.67
PRAMEF17Q5VTA0 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRAMEF17Q5VTA0 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PRAMEF17Q5VTA0 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRAMEF17Q5VTA0 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.26■□□□□ 0.67
PRAMEF17Q5VTA0 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRAMEF17Q5VTA0 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
PRAMEF17Q5VTA0 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PRAMEF17Q5VTA0 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRAMEF17Q5VTA0 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRAMEF17Q5VTA0 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRAMEF17Q5VTA0 KRT17P3-201ENST00000420566 1262 ntBASIC19.26■□□□□ 0.67
PRAMEF17Q5VTA0 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PRAMEF17Q5VTA0 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.26■□□□□ 0.67
PRAMEF17Q5VTA0 AL359736.2-201ENST00000621992 437 ntBASIC19.26■□□□□ 0.67
PRAMEF17Q5VTA0 MIR2861-201ENST00000636310 90 ntBASIC19.26■□□□□ 0.67
PRAMEF17Q5VTA0 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.26■□□□□ 0.67
PRAMEF17Q5VTA0 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRAMEF17Q5VTA0 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.26■□□□□ 0.67
PRAMEF17Q5VTA0 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.25■□□□□ 0.67
PRAMEF17Q5VTA0 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.25■□□□□ 0.67
PRAMEF17Q5VTA0 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRAMEF17Q5VTA0 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRAMEF17Q5VTA0 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRAMEF17Q5VTA0 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRAMEF17Q5VTA0 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PRAMEF17Q5VTA0 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PRAMEF17Q5VTA0 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.25■□□□□ 0.67
PRAMEF17Q5VTA0 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.25■□□□□ 0.67
PRAMEF17Q5VTA0 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PRAMEF17Q5VTA0 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.25■□□□□ 0.67
PRAMEF17Q5VTA0 C1QBPP2-201ENST00000528754 825 ntBASIC19.25■□□□□ 0.67
PRAMEF17Q5VTA0 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.25■□□□□ 0.67
PRAMEF17Q5VTA0 AC069544.1-201ENST00000609399 999 ntBASIC19.25■□□□□ 0.67
PRAMEF17Q5VTA0 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
PRAMEF17Q5VTA0 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.25■□□□□ 0.67
PRAMEF17Q5VTA0 AL121603.2-201ENST00000557373 2117 ntBASIC19.25■□□□□ 0.67
PRAMEF17Q5VTA0 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PRAMEF17Q5VTA0 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRAMEF17Q5VTA0 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRAMEF17Q5VTA0 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRAMEF17Q5VTA0 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRAMEF17Q5VTA0 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.24■□□□□ 0.67
PRAMEF17Q5VTA0 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEF17Q5VTA0 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEF17Q5VTA0 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
PRAMEF17Q5VTA0 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEF17Q5VTA0 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEF17Q5VTA0 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEF17Q5VTA0 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.24■□□□□ 0.67
PRAMEF17Q5VTA0 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms