Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.05■□□□□ 0.64
LRIF1Q5T3J3 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRIF1Q5T3J3 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.05■□□□□ 0.64
LRIF1Q5T3J3 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LRIF1Q5T3J3 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.05■□□□□ 0.64
LRIF1Q5T3J3 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
LRIF1Q5T3J3 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRIF1Q5T3J3 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
LRIF1Q5T3J3 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LRIF1Q5T3J3 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.05■□□□□ 0.64
LRIF1Q5T3J3 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.05■□□□□ 0.64
LRIF1Q5T3J3 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRIF1Q5T3J3 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRIF1Q5T3J3 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
LRIF1Q5T3J3 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
LRIF1Q5T3J3 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.04■□□□□ 0.64
LRIF1Q5T3J3 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LRIF1Q5T3J3 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.04■□□□□ 0.64
LRIF1Q5T3J3 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.04■□□□□ 0.64
LRIF1Q5T3J3 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.04■□□□□ 0.64
LRIF1Q5T3J3 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.04■□□□□ 0.64
LRIF1Q5T3J3 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LRIF1Q5T3J3 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LRIF1Q5T3J3 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRIF1Q5T3J3 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRIF1Q5T3J3 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.04■□□□□ 0.64
LRIF1Q5T3J3 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRIF1Q5T3J3 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
LRIF1Q5T3J3 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRIF1Q5T3J3 CDV3P1-201ENST00000471403 739 ntBASIC19.04■□□□□ 0.64
LRIF1Q5T3J3 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.04■□□□□ 0.64
LRIF1Q5T3J3 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.04■□□□□ 0.64
LRIF1Q5T3J3 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LRIF1Q5T3J3 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.04■□□□□ 0.64
LRIF1Q5T3J3 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRIF1Q5T3J3 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.04■□□□□ 0.64
LRIF1Q5T3J3 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRIF1Q5T3J3 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRIF1Q5T3J3 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LRIF1Q5T3J3 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRIF1Q5T3J3 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.03■□□□□ 0.64
LRIF1Q5T3J3 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
LRIF1Q5T3J3 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRIF1Q5T3J3 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
LRIF1Q5T3J3 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRIF1Q5T3J3 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.03■□□□□ 0.64
LRIF1Q5T3J3 AC097381.1-201ENST00000429019 1296 ntBASIC19.03■□□□□ 0.64
LRIF1Q5T3J3 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.03■□□□□ 0.64
LRIF1Q5T3J3 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRIF1Q5T3J3 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.03■□□□□ 0.64
LRIF1Q5T3J3 KRT18P14-201ENST00000534205 1250 ntBASIC19.03■□□□□ 0.64
LRIF1Q5T3J3 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.03■□□□□ 0.64
LRIF1Q5T3J3 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.03■□□□□ 0.64
LRIF1Q5T3J3 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.03■□□□□ 0.64
LRIF1Q5T3J3 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.03■□□□□ 0.64
LRIF1Q5T3J3 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
LRIF1Q5T3J3 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRIF1Q5T3J3 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRIF1Q5T3J3 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
LRIF1Q5T3J3 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRIF1Q5T3J3 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
LRIF1Q5T3J3 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRIF1Q5T3J3 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LRIF1Q5T3J3 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRIF1Q5T3J3 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRIF1Q5T3J3 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LRIF1Q5T3J3 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRIF1Q5T3J3 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LRIF1Q5T3J3 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRIF1Q5T3J3 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LRIF1Q5T3J3 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRIF1Q5T3J3 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRIF1Q5T3J3 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRIF1Q5T3J3 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
LRIF1Q5T3J3 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRIF1Q5T3J3 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LRIF1Q5T3J3 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
LRIF1Q5T3J3 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.02■□□□□ 0.64
LRIF1Q5T3J3 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.02■□□□□ 0.64
LRIF1Q5T3J3 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRIF1Q5T3J3 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.02■□□□□ 0.64
LRIF1Q5T3J3 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRIF1Q5T3J3 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.02■□□□□ 0.64
LRIF1Q5T3J3 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
LRIF1Q5T3J3 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRIF1Q5T3J3 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRIF1Q5T3J3 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.02■□□□□ 0.64
LRIF1Q5T3J3 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.02■□□□□ 0.63
LRIF1Q5T3J3 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.02■□□□□ 0.63
LRIF1Q5T3J3 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
LRIF1Q5T3J3 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
LRIF1Q5T3J3 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
LRIF1Q5T3J3 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
LRIF1Q5T3J3 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRIF1Q5T3J3 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.01■□□□□ 0.63
LRIF1Q5T3J3 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRIF1Q5T3J3 BX323043.1-201ENST00000641006 1765 ntBASIC19.01■□□□□ 0.63
LRIF1Q5T3J3 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRIF1Q5T3J3 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
LRIF1Q5T3J3 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms