Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 AL390719.1-204ENST00000412397 1219 ntBASIC17.72■□□□□ 0.43
LRRK2Q5S007 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.72■□□□□ 0.43
LRRK2Q5S007 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LRRK2Q5S007 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LRRK2Q5S007 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.72■□□□□ 0.43
LRRK2Q5S007 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
LRRK2Q5S007 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC17.72■□□□□ 0.43
LRRK2Q5S007 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC17.72■□□□□ 0.43
LRRK2Q5S007 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRK2Q5S007 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRK2Q5S007 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRK2Q5S007 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRK2Q5S007 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LRRK2Q5S007 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
LRRK2Q5S007 HMGA1P5-201ENST00000412453 271 ntBASIC17.71■□□□□ 0.43
LRRK2Q5S007 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.71■□□□□ 0.43
LRRK2Q5S007 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
LRRK2Q5S007 AC026471.6-201ENST00000622954 1905 ntBASIC17.71■□□□□ 0.43
LRRK2Q5S007 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRK2Q5S007 AC116050.2-201ENST00000612102 1779 ntBASIC17.71■□□□□ 0.43
LRRK2Q5S007 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LRRK2Q5S007 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LRRK2Q5S007 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRK2Q5S007 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRK2Q5S007 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC17.71■□□□□ 0.43
LRRK2Q5S007 PREB-202ENST00000406567 1910 ntTSL 5 BASIC17.71■□□□□ 0.43
LRRK2Q5S007 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.71■□□□□ 0.43
LRRK2Q5S007 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.71■□□□□ 0.43
LRRK2Q5S007 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.71■□□□□ 0.43
LRRK2Q5S007 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.71■□□□□ 0.43
LRRK2Q5S007 AC130371.2-201ENST00000619443 611 ntBASIC17.71■□□□□ 0.43
LRRK2Q5S007 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
LRRK2Q5S007 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LRRK2Q5S007 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRK2Q5S007 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRK2Q5S007 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.7■□□□□ 0.42
LRRK2Q5S007 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRK2Q5S007 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRK2Q5S007 TSPY5P-201ENST00000426936 936 ntBASIC17.7■□□□□ 0.42
LRRK2Q5S007 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.7■□□□□ 0.42
LRRK2Q5S007 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.7■□□□□ 0.42
LRRK2Q5S007 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.7■□□□□ 0.42
LRRK2Q5S007 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.7■□□□□ 0.42
LRRK2Q5S007 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.7■□□□□ 0.42
LRRK2Q5S007 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRK2Q5S007 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRRK2Q5S007 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
LRRK2Q5S007 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRK2Q5S007 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.7■□□□□ 0.42
LRRK2Q5S007 AC093458.2-201ENST00000623150 629 ntBASIC17.7■□□□□ 0.42
LRRK2Q5S007 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRRK2Q5S007 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC17.7■□□□□ 0.42
LRRK2Q5S007 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRK2Q5S007 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRK2Q5S007 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRK2Q5S007 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRK2Q5S007 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.69■□□□□ 0.42
LRRK2Q5S007 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC17.69■□□□□ 0.42
LRRK2Q5S007 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRK2Q5S007 AC093323.1-202ENST00000635031 2045 ntBASIC17.69■□□□□ 0.42
LRRK2Q5S007 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRK2Q5S007 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LRRK2Q5S007 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRK2Q5S007 AC068473.5-201ENST00000616428 2072 ntBASIC17.69■□□□□ 0.42
LRRK2Q5S007 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRK2Q5S007 INGX-201ENST00000359239 846 ntBASIC17.69■□□□□ 0.42
LRRK2Q5S007 PCED1CP-201ENST00000419887 785 ntBASIC17.69■□□□□ 0.42
LRRK2Q5S007 AC091390.4-202ENST00000476426 537 ntBASIC17.69■□□□□ 0.42
LRRK2Q5S007 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.69■□□□□ 0.42
LRRK2Q5S007 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRK2Q5S007 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRK2Q5S007 AC069148.1-201ENST00000608741 768 ntBASIC17.69■□□□□ 0.42
LRRK2Q5S007 COMT-203ENST00000403184 2217 ntTSL 2 BASIC17.69■□□□□ 0.42
LRRK2Q5S007 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRK2Q5S007 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRK2Q5S007 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
LRRK2Q5S007 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.69■□□□□ 0.42
LRRK2Q5S007 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.69■□□□□ 0.42
LRRK2Q5S007 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
LRRK2Q5S007 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRK2Q5S007 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LRRK2Q5S007 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
LRRK2Q5S007 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC17.68■□□□□ 0.42
LRRK2Q5S007 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.68■□□□□ 0.42
LRRK2Q5S007 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LRRK2Q5S007 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRK2Q5S007 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRK2Q5S007 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.68■□□□□ 0.42
LRRK2Q5S007 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRK2Q5S007 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRK2Q5S007 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.68■□□□□ 0.42
LRRK2Q5S007 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.68■□□□□ 0.42
LRRK2Q5S007 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.68■□□□□ 0.42
LRRK2Q5S007 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LRRK2Q5S007 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.68■□□□□ 0.42
LRRK2Q5S007 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRK2Q5S007 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRK2Q5S007 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
LRRK2Q5S007 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.68■□□□□ 0.42
LRRK2Q5S007 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms