Protein–RNA interactions for Protein: Q53EL6

PDCD4, Programmed cell death protein 4, humanhuman

Known RBP Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4Q53EL6 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.4■□□□□ 0.7
PDCD4Q53EL6 AC091799.1-201ENST00000422823 811 ntBASIC19.4■□□□□ 0.7
PDCD4Q53EL6 KRT18P20-201ENST00000548986 1279 ntBASIC19.4■□□□□ 0.7
PDCD4Q53EL6 AC243732.1-201ENST00000612648 864 ntBASIC19.4■□□□□ 0.7
PDCD4Q53EL6 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDCD4Q53EL6 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.4■□□□□ 0.7
PDCD4Q53EL6 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PDCD4Q53EL6 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PDCD4Q53EL6 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PDCD4Q53EL6 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDCD4Q53EL6 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.4■□□□□ 0.7
PDCD4Q53EL6 DPP3P2-201ENST00000416030 1696 ntBASIC19.4■□□□□ 0.7
PDCD4Q53EL6 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PDCD4Q53EL6 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
PDCD4Q53EL6 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.39■□□□□ 0.7
PDCD4Q53EL6 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PDCD4Q53EL6 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDCD4Q53EL6 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDCD4Q53EL6 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
PDCD4Q53EL6 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.39■□□□□ 0.69
PDCD4Q53EL6 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PDCD4Q53EL6 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDCD4Q53EL6 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.39■□□□□ 0.69
PDCD4Q53EL6 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.39■□□□□ 0.69
PDCD4Q53EL6 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PDCD4Q53EL6 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.39■□□□□ 0.69
PDCD4Q53EL6 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.39■□□□□ 0.69
PDCD4Q53EL6 LINC02228-203ENST00000641970 1355 ntBASIC19.39■□□□□ 0.69
PDCD4Q53EL6 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDCD4Q53EL6 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDCD4Q53EL6 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.39■□□□□ 0.69
PDCD4Q53EL6 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.39■□□□□ 0.69
PDCD4Q53EL6 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.39■□□□□ 0.69
PDCD4Q53EL6 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.39■□□□□ 0.69
PDCD4Q53EL6 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
PDCD4Q53EL6 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDCD4Q53EL6 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDCD4Q53EL6 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.38■□□□□ 0.69
PDCD4Q53EL6 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDCD4Q53EL6 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDCD4Q53EL6 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDCD4Q53EL6 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDCD4Q53EL6 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.38■□□□□ 0.69
PDCD4Q53EL6 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
PDCD4Q53EL6 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDCD4Q53EL6 AC007322.3-201ENST00000426526 701 ntBASIC19.38■□□□□ 0.69
PDCD4Q53EL6 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PDCD4Q53EL6 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.38■□□□□ 0.69
PDCD4Q53EL6 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.38■□□□□ 0.69
PDCD4Q53EL6 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.38■□□□□ 0.69
PDCD4Q53EL6 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PDCD4Q53EL6 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.38■□□□□ 0.69
PDCD4Q53EL6 AC142381.2-201ENST00000566120 298 ntBASIC19.38■□□□□ 0.69
PDCD4Q53EL6 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
PDCD4Q53EL6 AL139246.5-201ENST00000606645 996 ntBASIC19.38■□□□□ 0.69
PDCD4Q53EL6 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.38■□□□□ 0.69
PDCD4Q53EL6 TMEM179-206ENST00000616017 1645 ntBASIC19.38■□□□□ 0.69
PDCD4Q53EL6 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.38■□□□□ 0.69
PDCD4Q53EL6 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDCD4Q53EL6 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PDCD4Q53EL6 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
PDCD4Q53EL6 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PDCD4Q53EL6 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDCD4Q53EL6 RBM17P2-201ENST00000616397 1405 ntBASIC19.37■□□□□ 0.69
PDCD4Q53EL6 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PDCD4Q53EL6 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.37■□□□□ 0.69
PDCD4Q53EL6 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PDCD4Q53EL6 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PDCD4Q53EL6 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.37■□□□□ 0.69
PDCD4Q53EL6 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.37■□□□□ 0.69
PDCD4Q53EL6 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDCD4Q53EL6 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PDCD4Q53EL6 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PDCD4Q53EL6 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
PDCD4Q53EL6 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
PDCD4Q53EL6 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDCD4Q53EL6 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.37■□□□□ 0.69
PDCD4Q53EL6 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDCD4Q53EL6 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDCD4Q53EL6 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.36■□□□□ 0.69
PDCD4Q53EL6 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.36■□□□□ 0.69
PDCD4Q53EL6 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDCD4Q53EL6 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDCD4Q53EL6 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDCD4Q53EL6 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDCD4Q53EL6 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDCD4Q53EL6 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDCD4Q53EL6 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDCD4Q53EL6 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
PDCD4Q53EL6 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.36■□□□□ 0.69
PDCD4Q53EL6 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.36■□□□□ 0.69
PDCD4Q53EL6 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
PDCD4Q53EL6 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDCD4Q53EL6 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDCD4Q53EL6 AC116562.4-201ENST00000641316 2276 ntBASIC19.36■□□□□ 0.69
PDCD4Q53EL6 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.36■□□□□ 0.69
PDCD4Q53EL6 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDCD4Q53EL6 BX119927.1-201ENST00000636596 1552 ntBASIC19.36■□□□□ 0.69
PDCD4Q53EL6 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PDCD4Q53EL6 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms