Protein–RNA interactions for Protein: Q495D7

LINC01559, Putative uncharacterized protein encoded by LINC01559, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01559Q495D7 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LINC01559Q495D7 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
LINC01559Q495D7 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC15.04■□□□□ -0
LINC01559Q495D7 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC15.04■□□□□ -0
LINC01559Q495D7 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC15.04■□□□□ -0
LINC01559Q495D7 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
LINC01559Q495D7 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC15.04■□□□□ -0
LINC01559Q495D7 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
LINC01559Q495D7 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC15.04■□□□□ -0
LINC01559Q495D7 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LINC01559Q495D7 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
LINC01559Q495D7 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LINC01559Q495D7 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC15.03■□□□□ -0
LINC01559Q495D7 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC15.03■□□□□ -0
LINC01559Q495D7 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC15.03■□□□□ -0
LINC01559Q495D7 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
LINC01559Q495D7 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC15.03■□□□□ -0
LINC01559Q495D7 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LINC01559Q495D7 AC087289.5-201ENST00000586076 3175 ntBASIC15.03■□□□□ -0
LINC01559Q495D7 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
LINC01559Q495D7 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
LINC01559Q495D7 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
LINC01559Q495D7 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC15.03■□□□□ -0
LINC01559Q495D7 AL136116.3-201ENST00000402907 1138 ntBASIC15.03■□□□□ -0
LINC01559Q495D7 GRAMD4P2-201ENST00000423297 1097 ntBASIC15.03■□□□□ -0
LINC01559Q495D7 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC15.03■□□□□ -0
LINC01559Q495D7 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC15.03■□□□□ -0
LINC01559Q495D7 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LINC01559Q495D7 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC15.03■□□□□ -0
LINC01559Q495D7 AC024257.2-201ENST00000549699 147 ntBASIC15.03■□□□□ -0
LINC01559Q495D7 MIR3908-201ENST00000579798 126 ntBASIC15.03■□□□□ -0
LINC01559Q495D7 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC15.03■□□□□ -0
LINC01559Q495D7 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC15.03■□□□□ -0
LINC01559Q495D7 HCG11-201ENST00000411553 5696 ntBASIC15.03■□□□□ -0
LINC01559Q495D7 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC15.03■□□□□ -0
LINC01559Q495D7 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
LINC01559Q495D7 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
LINC01559Q495D7 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LINC01559Q495D7 AC125437.2-201ENST00000625180 2167 ntBASIC15.02■□□□□ -0
LINC01559Q495D7 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC15.02■□□□□ -0
LINC01559Q495D7 LBX2-AS1-202ENST00000603175 2083 ntBASIC15.02■□□□□ -0
LINC01559Q495D7 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LINC01559Q495D7 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC15.02■□□□□ -0
LINC01559Q495D7 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LINC01559Q495D7 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LINC01559Q495D7 MIR572-201ENST00000384983 95 ntBASIC15.02■□□□□ -0
LINC01559Q495D7 AL136162.1-201ENST00000607711 1078 ntBASIC15.02■□□□□ -0
LINC01559Q495D7 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LINC01559Q495D7 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LINC01559Q495D7 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC15.02□□□□□ -0.01
LINC01559Q495D7 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
LINC01559Q495D7 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LINC01559Q495D7 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
LINC01559Q495D7 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC15.02□□□□□ -0.01
LINC01559Q495D7 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC15.02□□□□□ -0.01
LINC01559Q495D7 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LINC01559Q495D7 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC15.01□□□□□ -0.01
LINC01559Q495D7 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
LINC01559Q495D7 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC15.01□□□□□ -0.01
LINC01559Q495D7 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC15.01□□□□□ -0.01
LINC01559Q495D7 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
LINC01559Q495D7 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC15.01□□□□□ -0.01
LINC01559Q495D7 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LINC01559Q495D7 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC15.01□□□□□ -0.01
LINC01559Q495D7 AC135279.3-201ENST00000610945 1311 ntBASIC15.01□□□□□ -0.01
LINC01559Q495D7 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC15.01□□□□□ -0.01
LINC01559Q495D7 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
LINC01559Q495D7 AC099791.1-201ENST00000416440 715 ntBASIC15.01□□□□□ -0.01
LINC01559Q495D7 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC01559Q495D7 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC15.01□□□□□ -0.01
LINC01559Q495D7 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
LINC01559Q495D7 AC027682.1-201ENST00000562846 899 ntBASIC15.01□□□□□ -0.01
LINC01559Q495D7 AC008764.7-201ENST00000593779 1081 ntBASIC15.01□□□□□ -0.01
LINC01559Q495D7 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC01559Q495D7 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC01559Q495D7 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC01559Q495D7 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC15.01□□□□□ -0.01
LINC01559Q495D7 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LINC01559Q495D7 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
LINC01559Q495D7 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LINC01559Q495D7 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
LINC01559Q495D7 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC01559Q495D7 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC15.01□□□□□ -0.01
LINC01559Q495D7 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC01559Q495D7 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LINC01559Q495D7 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
LINC01559Q495D7 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC15.01□□□□□ -0.01
LINC01559Q495D7 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC15.01□□□□□ -0.01
LINC01559Q495D7 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LINC01559Q495D7 KRT16P2-201ENST00000414673 1423 ntBASIC15□□□□□ -0.01
LINC01559Q495D7 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LINC01559Q495D7 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
LINC01559Q495D7 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC15□□□□□ -0.01
LINC01559Q495D7 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
LINC01559Q495D7 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
LINC01559Q495D7 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
LINC01559Q495D7 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC15□□□□□ -0.01
LINC01559Q495D7 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LINC01559Q495D7 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LINC01559Q495D7 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms