Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SHROOM1Q2M3G4 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC23.74■■□□□ 1.39
SHROOM1Q2M3G4 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SHROOM1Q2M3G4 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC23.74■■□□□ 1.39
SHROOM1Q2M3G4 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SHROOM1Q2M3G4 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
SHROOM1Q2M3G4 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
SHROOM1Q2M3G4 AL390719.1-204ENST00000412397 1219 ntBASIC23.73■■□□□ 1.39
SHROOM1Q2M3G4 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
SHROOM1Q2M3G4 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC23.73■■□□□ 1.39
SHROOM1Q2M3G4 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SHROOM1Q2M3G4 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SHROOM1Q2M3G4 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SHROOM1Q2M3G4 GXYLT1P3-201ENST00000453058 1193 ntBASIC23.72■■□□□ 1.39
SHROOM1Q2M3G4 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC23.72■■□□□ 1.39
SHROOM1Q2M3G4 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC23.72■■□□□ 1.39
SHROOM1Q2M3G4 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC23.72■■□□□ 1.39
SHROOM1Q2M3G4 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC23.72■■□□□ 1.39
SHROOM1Q2M3G4 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC23.72■■□□□ 1.39
SHROOM1Q2M3G4 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
SHROOM1Q2M3G4 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC23.72■■□□□ 1.39
SHROOM1Q2M3G4 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
SHROOM1Q2M3G4 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
SHROOM1Q2M3G4 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
SHROOM1Q2M3G4 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SHROOM1Q2M3G4 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC23.71■■□□□ 1.39
SHROOM1Q2M3G4 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC23.71■■□□□ 1.39
SHROOM1Q2M3G4 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SHROOM1Q2M3G4 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
SHROOM1Q2M3G4 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SHROOM1Q2M3G4 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SHROOM1Q2M3G4 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC23.71■■□□□ 1.39
SHROOM1Q2M3G4 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC23.71■■□□□ 1.39
SHROOM1Q2M3G4 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC23.71■■□□□ 1.39
SHROOM1Q2M3G4 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC23.71■■□□□ 1.39
SHROOM1Q2M3G4 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC23.71■■□□□ 1.39
SHROOM1Q2M3G4 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SHROOM1Q2M3G4 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC23.7■■□□□ 1.39
SHROOM1Q2M3G4 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC23.7■■□□□ 1.39
SHROOM1Q2M3G4 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
SHROOM1Q2M3G4 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SHROOM1Q2M3G4 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SHROOM1Q2M3G4 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
SHROOM1Q2M3G4 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SHROOM1Q2M3G4 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SHROOM1Q2M3G4 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC23.7■■□□□ 1.38
SHROOM1Q2M3G4 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
SHROOM1Q2M3G4 ECEL1P3-201ENST00000427961 737 ntBASIC23.7■■□□□ 1.38
SHROOM1Q2M3G4 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
SHROOM1Q2M3G4 AC012618.2-201ENST00000428058 849 ntBASIC23.7■■□□□ 1.38
SHROOM1Q2M3G4 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC23.7■■□□□ 1.38
SHROOM1Q2M3G4 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC23.7■■□□□ 1.38
SHROOM1Q2M3G4 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC23.7■■□□□ 1.38
SHROOM1Q2M3G4 AC110285.5-201ENST00000611501 352 ntBASIC23.7■■□□□ 1.38
SHROOM1Q2M3G4 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
SHROOM1Q2M3G4 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SHROOM1Q2M3G4 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
SHROOM1Q2M3G4 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SHROOM1Q2M3G4 PTBP1P-201ENST00000554374 1601 ntBASIC23.7■■□□□ 1.38
SHROOM1Q2M3G4 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC23.7■■□□□ 1.38
SHROOM1Q2M3G4 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
SHROOM1Q2M3G4 AC026310.3-201ENST00000625186 2373 ntBASIC23.69■■□□□ 1.38
SHROOM1Q2M3G4 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SHROOM1Q2M3G4 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SHROOM1Q2M3G4 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC23.69■■□□□ 1.38
SHROOM1Q2M3G4 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SHROOM1Q2M3G4 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SHROOM1Q2M3G4 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC23.69■■□□□ 1.38
SHROOM1Q2M3G4 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC23.69■■□□□ 1.38
SHROOM1Q2M3G4 AC113410.3-201ENST00000623366 203 ntBASIC23.69■■□□□ 1.38
SHROOM1Q2M3G4 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC23.69■■□□□ 1.38
SHROOM1Q2M3G4 AL049637.2-201ENST00000641778 930 ntBASIC23.69■■□□□ 1.38
SHROOM1Q2M3G4 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC23.69■■□□□ 1.38
SHROOM1Q2M3G4 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC23.69■■□□□ 1.38
SHROOM1Q2M3G4 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
SHROOM1Q2M3G4 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SHROOM1Q2M3G4 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
SHROOM1Q2M3G4 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
SHROOM1Q2M3G4 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SHROOM1Q2M3G4 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC23.68■■□□□ 1.38
SHROOM1Q2M3G4 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC23.68■■□□□ 1.38
SHROOM1Q2M3G4 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC23.68■■□□□ 1.38
SHROOM1Q2M3G4 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
SHROOM1Q2M3G4 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
SHROOM1Q2M3G4 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC23.68■■□□□ 1.38
SHROOM1Q2M3G4 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SHROOM1Q2M3G4 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
SHROOM1Q2M3G4 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SHROOM1Q2M3G4 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SHROOM1Q2M3G4 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC23.67■■□□□ 1.38
SHROOM1Q2M3G4 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC23.67■■□□□ 1.38
SHROOM1Q2M3G4 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC23.67■■□□□ 1.38
SHROOM1Q2M3G4 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC23.67■■□□□ 1.38
SHROOM1Q2M3G4 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SHROOM1Q2M3G4 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
SHROOM1Q2M3G4 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC23.66■■□□□ 1.38
SHROOM1Q2M3G4 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
SHROOM1Q2M3G4 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SHROOM1Q2M3G4 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SHROOM1Q2M3G4 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC23.66■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms