Protein–RNA interactions for Protein: Q12200

NCR1, NPC intracellular cholesterol transporter 1-related protein 1, yeastyeast

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NCR1Q12200 21S_rRNA21S_rRNA 3296 nt3.9□□□□□ -1.78
NCR1Q12200 BCK2YER167W 2556 nt3.9□□□□□ -1.78
NCR1Q12200 MNE1YOR350C 1992 nt3.9□□□□□ -1.79
NCR1Q12200 SCH9YHR205W 2475 nt3.89□□□□□ -1.79
NCR1Q12200 LRG1YDL240W 3054 nt3.89□□□□□ -1.79
NCR1Q12200 ASE1YOR058C 2658 nt3.88□□□□□ -1.79
NCR1Q12200 SBE22YHR103W 2559 nt3.88□□□□□ -1.79
NCR1Q12200 YDR089WYDR089W 2610 nt3.88□□□□□ -1.79
NCR1Q12200 TFC1YBR123C 1950 nt3.88□□□□□ -1.79
NCR1Q12200 NTO1YPR031W 2247 nt3.88□□□□□ -1.79
NCR1Q12200 DBP10YDL031W 2988 nt3.87□□□□□ -1.79
NCR1Q12200 COG6YNL041C 2520 nt3.87□□□□□ -1.79
NCR1Q12200 RPL23BYER117W 414 nt3.87□□□□□ -1.79
NCR1Q12200 YIL002W-AYIL002W-A 210 nt3.87□□□□□ -1.79
NCR1Q12200 SWH1YAR042W 3567 nt3.87□□□□□ -1.79
NCR1Q12200 YOL019W-AYOL019W-A 153 nt3.86□□□□□ -1.79
NCR1Q12200 SWI6YLR182W 2412 nt3.86□□□□□ -1.79
NCR1Q12200 RAD54YGL163C 2697 nt3.85□□□□□ -1.79
NCR1Q12200 PWP2YCR057C 2772 nt3.85□□□□□ -1.79
NCR1Q12200 RAD4YER162C 2265 nt3.85□□□□□ -1.79
NCR1Q12200 YNL114CYNL114C 372 nt3.85□□□□□ -1.79
NCR1Q12200 SQS1YNL224C 2304 nt3.85□□□□□ -1.79
NCR1Q12200 MLH3YPL164C 2148 nt3.85□□□□□ -1.79
NCR1Q12200 SEF1YBL066C 3447 nt3.85□□□□□ -1.79
NCR1Q12200 MAD1YGL086W 2250 nt3.84□□□□□ -1.79
NCR1Q12200 MPH1YIR002C 2982 nt3.84□□□□□ -1.79
NCR1Q12200 SAK1YER129W 3429 nt3.84□□□□□ -1.8
NCR1Q12200 YAT2YER024W 2772 nt3.84□□□□□ -1.8
NCR1Q12200 ARO1YDR127W 4767 nt3.83□□□□□ -1.8
NCR1Q12200 SLA1YBL007C 3735 nt3.83□□□□□ -1.8
NCR1Q12200 FAP7YDL166C 594 nt3.83□□□□□ -1.8
NCR1Q12200 YMR31YFR049W 372 nt3.83□□□□□ -1.8
NCR1Q12200 YLR154C-HYLR154C-H 132 nt3.83□□□□□ -1.8
NCR1Q12200 YLR156C-AYLR156C-A 132 nt3.83□□□□□ -1.8
NCR1Q12200 YLR157C-CYLR157C-C 132 nt3.83□□□□□ -1.8
NCR1Q12200 YLR159C-AYLR159C-A 132 nt3.83□□□□□ -1.8
NCR1Q12200 ORC3YLL004W 1851 nt3.83□□□□□ -1.8
NCR1Q12200 RPN2YIL075C 2838 nt3.83□□□□□ -1.8
NCR1Q12200 RPH1YER169W 2391 nt3.82□□□□□ -1.8
NCR1Q12200 RPS23BYPR132W 438 nt3.82□□□□□ -1.8
NCR1Q12200 CIN1YOR349W 3045 nt3.82□□□□□ -1.8
NCR1Q12200 SEG1YMR086W 2883 nt3.82□□□□□ -1.8
NCR1Q12200 VPS35YJL154C 2835 nt3.82□□□□□ -1.8
NCR1Q12200 SET2YJL168C 2202 nt3.82□□□□□ -1.8
NCR1Q12200 PRP22YER013W 3438 nt3.81□□□□□ -1.8
NCR1Q12200 BIR1YJR089W 2865 nt3.81□□□□□ -1.8
NCR1Q12200 YLR416CYLR416C 399 nt3.8□□□□□ -1.8
NCR1Q12200 snR47snR47 99 nt3.8□□□□□ -1.8
NCR1Q12200 PUT3YKL015W 2940 nt3.8□□□□□ -1.8
NCR1Q12200 SVL3YPL032C 2478 nt3.8□□□□□ -1.8
NCR1Q12200 tC(GCA)BtC(GCA)B 72 nt3.79□□□□□ -1.8
NCR1Q12200 tC(GCA)GtC(GCA)G 72 nt3.79□□□□□ -1.8
NCR1Q12200 tC(GCA)P1tC(GCA)P1 72 nt3.79□□□□□ -1.8
NCR1Q12200 tC(GCA)P2tC(GCA)P2 72 nt3.79□□□□□ -1.8
NCR1Q12200 YLR352WYLR352W 2424 nt3.79□□□□□ -1.8
NCR1Q12200 YGL014C-AYGL014C-A 162 nt3.78□□□□□ -1.8
NCR1Q12200 RSM19YNR037C 276 nt3.78□□□□□ -1.8
NCR1Q12200 TIM12YBR091C 330 nt3.78□□□□□ -1.8
NCR1Q12200 YDL206WYDL206W 2289 nt3.78□□□□□ -1.8
NCR1Q12200 ALA1YOR335C 2877 nt3.77□□□□□ -1.81
NCR1Q12200 ATG26YLR189C 3597 nt3.77□□□□□ -1.81
NCR1Q12200 NOP9YJL010C 2001 nt3.77□□□□□ -1.81
NCR1Q12200 XRS2YDR369C 2565 nt3.76□□□□□ -1.81
NCR1Q12200 YDL025W-AYDL025W-A 105 nt3.76□□□□□ -1.81
NCR1Q12200 HFM1YGL251C 3564 nt3.75□□□□□ -1.81
NCR1Q12200 YDR354C-AYDR354C-A 144 nt3.75□□□□□ -1.81
NCR1Q12200 RPS12YOR369C 432 nt3.75□□□□□ -1.81
NCR1Q12200 YPR108W-AYPR108W-A 213 nt3.75□□□□□ -1.81
NCR1Q12200 SKP2YNL311C 2292 nt3.74□□□□□ -1.81
NCR1Q12200 RTT107YHR154W 3213 nt3.74□□□□□ -1.81
NCR1Q12200 RPO31YOR116C 4383 nt3.74□□□□□ -1.81
NCR1Q12200 APE2YKL157W 2859 nt3.74□□□□□ -1.81
NCR1Q12200 RRP6YOR001W 2202 nt3.74□□□□□ -1.81
NCR1Q12200 TTI1YKL033W 3117 nt3.73□□□□□ -1.81
NCR1Q12200 YKU80YMR106C 1890 nt3.73□□□□□ -1.81
NCR1Q12200 POL1YNL102W 4407 nt3.73□□□□□ -1.81
NCR1Q12200 BNI4YNL233W 2679 nt3.73□□□□□ -1.81
NCR1Q12200 GLC3YEL011W 2115 nt3.73□□□□□ -1.81
NCR1Q12200 YCG1YDR325W 3108 nt3.73□□□□□ -1.81
NCR1Q12200 KAP120YPL125W 3099 nt3.72□□□□□ -1.81
NCR1Q12200 SEC1YDR164C 2175 nt3.72□□□□□ -1.81
NCR1Q12200 LHS1YKL073W 2646 nt3.72□□□□□ -1.81
NCR1Q12200 TAF1YGR274C 3201 nt3.72□□□□□ -1.81
NCR1Q12200 YHR073W-AYHR073W-A 177 nt3.72□□□□□ -1.81
NCR1Q12200 YJL026C-AYJL026C-A 222 nt3.72□□□□□ -1.81
NCR1Q12200 YBL039C-AYBL039C-A 84 nt3.72□□□□□ -1.81
NCR1Q12200 YOR108C-AYOR108C-A 210 nt3.72□□□□□ -1.81
NCR1Q12200 CAF130YGR134W 3369 nt3.72□□□□□ -1.81
NCR1Q12200 PTP3YER075C 2787 nt3.72□□□□□ -1.81
NCR1Q12200 RPA135YPR010C 3612 nt3.71□□□□□ -1.81
NCR1Q12200 YLL020CYLL020C 306 nt3.71□□□□□ -1.82
NCR1Q12200 YLR286W-AYLR286W-A 135 nt3.71□□□□□ -1.82
NCR1Q12200 NUP159YIL115C 4383 nt3.71□□□□□ -1.82
NCR1Q12200 SPT16YGL207W 3108 nt3.71□□□□□ -1.82
NCR1Q12200 PHM6YDR281C 315 nt3.7□□□□□ -1.82
NCR1Q12200 ACB1YGR037C 264 nt3.7□□□□□ -1.82
NCR1Q12200 FAR1YJL157C 2493 nt3.7□□□□□ -1.82
NCR1Q12200 RAD2YGR258C 3096 nt3.7□□□□□ -1.82
NCR1Q12200 IFH1YLR223C 3258 nt3.7□□□□□ -1.82
NCR1Q12200 RSF2YJR127C 4143 nt3.7□□□□□ -1.82
Retrieved 100 of 7,029 protein–RNA pairs in 118.3 ms