Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC073111.5-205ENST00000641717 521 ntBASIC16.26■□□□□ 0.19
CX3CL1P78423 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CX3CL1P78423 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CX3CL1P78423 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC16.26■□□□□ 0.19
CX3CL1P78423 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CX3CL1P78423 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC16.26■□□□□ 0.19
CX3CL1P78423 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CX3CL1P78423 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
CX3CL1P78423 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CX3CL1P78423 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CX3CL1P78423 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CX3CL1P78423 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CX3CL1P78423 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CX3CL1P78423 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CX3CL1P78423 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CX3CL1P78423 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CX3CL1P78423 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CX3CL1P78423 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CX3CL1P78423 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CX3CL1P78423 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CX3CL1P78423 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC16.25■□□□□ 0.19
CX3CL1P78423 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
CX3CL1P78423 BET1L-204ENST00000410108 637 ntTSL 3 BASIC16.25■□□□□ 0.19
CX3CL1P78423 VMO1-204ENST00000441199 741 ntTSL 2 BASIC16.25■□□□□ 0.19
CX3CL1P78423 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC16.25■□□□□ 0.19
CX3CL1P78423 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC16.25■□□□□ 0.19
CX3CL1P78423 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC16.25■□□□□ 0.19
CX3CL1P78423 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC16.25■□□□□ 0.19
CX3CL1P78423 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CX3CL1P78423 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC16.25■□□□□ 0.19
CX3CL1P78423 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CX3CL1P78423 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CX3CL1P78423 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CX3CL1P78423 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CX3CL1P78423 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC16.25■□□□□ 0.19
CX3CL1P78423 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CX3CL1P78423 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
CX3CL1P78423 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CX3CL1P78423 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CX3CL1P78423 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC16.24■□□□□ 0.19
CX3CL1P78423 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
CX3CL1P78423 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC16.24■□□□□ 0.19
CX3CL1P78423 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC16.24■□□□□ 0.19
CX3CL1P78423 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC16.24■□□□□ 0.19
CX3CL1P78423 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CX3CL1P78423 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CX3CL1P78423 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CX3CL1P78423 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
CX3CL1P78423 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CX3CL1P78423 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CX3CL1P78423 CDCA4P2-201ENST00000441182 718 ntBASIC16.24■□□□□ 0.19
CX3CL1P78423 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC16.24■□□□□ 0.19
CX3CL1P78423 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CX3CL1P78423 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC16.24■□□□□ 0.19
CX3CL1P78423 AC138932.1-201ENST00000534164 6830 ntBASIC16.24■□□□□ 0.19
CX3CL1P78423 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC16.24■□□□□ 0.19
CX3CL1P78423 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CX3CL1P78423 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CX3CL1P78423 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CX3CL1P78423 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC16.24■□□□□ 0.19
CX3CL1P78423 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CX3CL1P78423 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CX3CL1P78423 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CX3CL1P78423 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CX3CL1P78423 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CX3CL1P78423 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CX3CL1P78423 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CX3CL1P78423 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC16.23■□□□□ 0.19
CX3CL1P78423 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CX3CL1P78423 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CX3CL1P78423 APTR-203ENST00000430801 583 ntTSL 5 BASIC16.23■□□□□ 0.19
CX3CL1P78423 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CX3CL1P78423 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC16.23■□□□□ 0.19
CX3CL1P78423 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC16.23■□□□□ 0.19
CX3CL1P78423 RARRES2P4-201ENST00000514074 484 ntBASIC16.23■□□□□ 0.19
CX3CL1P78423 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC16.23■□□□□ 0.19
CX3CL1P78423 AC069236.1-201ENST00000604339 616 ntBASIC16.23■□□□□ 0.19
CX3CL1P78423 AC005181.1-201ENST00000604782 1256 ntBASIC16.23■□□□□ 0.19
CX3CL1P78423 AC008694.1-202ENST00000636953 945 ntBASIC16.23■□□□□ 0.19
CX3CL1P78423 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CX3CL1P78423 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CX3CL1P78423 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CX3CL1P78423 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CX3CL1P78423 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC16.23■□□□□ 0.19
CX3CL1P78423 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CX3CL1P78423 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
CX3CL1P78423 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CX3CL1P78423 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC16.23■□□□□ 0.19
CX3CL1P78423 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CX3CL1P78423 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
CX3CL1P78423 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC16.22■□□□□ 0.19
CX3CL1P78423 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CX3CL1P78423 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC16.22■□□□□ 0.19
CX3CL1P78423 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CX3CL1P78423 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CX3CL1P78423 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
CX3CL1P78423 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CX3CL1P78423 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CX3CL1P78423 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CX3CL1P78423 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms