Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.93■□□□□ 0.94
IRX4P78413 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.93■□□□□ 0.94
IRX4P78413 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
IRX4P78413 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
IRX4P78413 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.93■□□□□ 0.94
IRX4P78413 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.93■□□□□ 0.94
IRX4P78413 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
IRX4P78413 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
IRX4P78413 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
IRX4P78413 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
IRX4P78413 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
IRX4P78413 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
IRX4P78413 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
IRX4P78413 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
IRX4P78413 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
IRX4P78413 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
IRX4P78413 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.92■□□□□ 0.94
IRX4P78413 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.92■□□□□ 0.94
IRX4P78413 UNC93B4-201ENST00000505679 747 ntBASIC20.92■□□□□ 0.94
IRX4P78413 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.92■□□□□ 0.94
IRX4P78413 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.92■□□□□ 0.94
IRX4P78413 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
IRX4P78413 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.92■□□□□ 0.94
IRX4P78413 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
IRX4P78413 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
IRX4P78413 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
IRX4P78413 AC010980.2-201ENST00000587099 1412 ntBASIC20.92■□□□□ 0.94
IRX4P78413 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.92■□□□□ 0.94
IRX4P78413 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
IRX4P78413 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.92■□□□□ 0.94
IRX4P78413 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
IRX4P78413 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.92■□□□□ 0.94
IRX4P78413 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
IRX4P78413 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
IRX4P78413 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
IRX4P78413 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
IRX4P78413 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
IRX4P78413 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
IRX4P78413 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
IRX4P78413 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
IRX4P78413 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
IRX4P78413 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
IRX4P78413 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
IRX4P78413 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.91■□□□□ 0.94
IRX4P78413 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
IRX4P78413 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
IRX4P78413 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
IRX4P78413 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.91■□□□□ 0.94
IRX4P78413 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
IRX4P78413 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
IRX4P78413 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
IRX4P78413 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.91■□□□□ 0.94
IRX4P78413 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.91■□□□□ 0.94
IRX4P78413 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
IRX4P78413 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
IRX4P78413 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
IRX4P78413 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
IRX4P78413 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
IRX4P78413 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
IRX4P78413 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
IRX4P78413 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.9■□□□□ 0.94
IRX4P78413 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
IRX4P78413 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.9■□□□□ 0.94
IRX4P78413 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
IRX4P78413 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.9■□□□□ 0.94
IRX4P78413 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.9■□□□□ 0.94
IRX4P78413 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
IRX4P78413 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
IRX4P78413 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.9■□□□□ 0.94
IRX4P78413 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.9■□□□□ 0.94
IRX4P78413 AC120498.10-201ENST00000621827 505 ntBASIC20.9■□□□□ 0.94
IRX4P78413 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.9■□□□□ 0.94
IRX4P78413 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
IRX4P78413 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC20.9■□□□□ 0.94
IRX4P78413 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
IRX4P78413 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
IRX4P78413 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
IRX4P78413 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
IRX4P78413 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.89■□□□□ 0.94
IRX4P78413 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
IRX4P78413 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
IRX4P78413 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.89■□□□□ 0.93
IRX4P78413 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
IRX4P78413 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
IRX4P78413 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
IRX4P78413 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
IRX4P78413 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.89■□□□□ 0.93
IRX4P78413 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.89■□□□□ 0.93
IRX4P78413 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
IRX4P78413 AC026366.1-201ENST00000488803 879 ntBASIC20.89■□□□□ 0.93
IRX4P78413 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.89■□□□□ 0.93
IRX4P78413 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.89■□□□□ 0.93
IRX4P78413 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
IRX4P78413 AC008175.2-201ENST00000612840 297 ntBASIC20.89■□□□□ 0.93
IRX4P78413 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
IRX4P78413 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.89■□□□□ 0.93
IRX4P78413 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
IRX4P78413 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
IRX4P78413 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
IRX4P78413 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms