Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 ADK-206ENST00000541550 2222 ntTSL 2 BASIC14.07□□□□□ -0.16
CKS1BP61024 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CKS1BP61024 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC14.07□□□□□ -0.16
CKS1BP61024 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CKS1BP61024 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CKS1BP61024 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CKS1BP61024 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CKS1BP61024 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CKS1BP61024 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CKS1BP61024 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CKS1BP61024 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC14.07□□□□□ -0.16
CKS1BP61024 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC14.07□□□□□ -0.16
CKS1BP61024 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CKS1BP61024 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC14.07□□□□□ -0.16
CKS1BP61024 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CKS1BP61024 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CKS1BP61024 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC14.07□□□□□ -0.16
CKS1BP61024 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CKS1BP61024 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CKS1BP61024 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CKS1BP61024 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CKS1BP61024 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CKS1BP61024 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC14.07□□□□□ -0.16
CKS1BP61024 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
CKS1BP61024 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CKS1BP61024 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CKS1BP61024 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CKS1BP61024 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CKS1BP61024 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CKS1BP61024 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC14.06□□□□□ -0.16
CKS1BP61024 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CKS1BP61024 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC14.06□□□□□ -0.16
CKS1BP61024 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CKS1BP61024 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CKS1BP61024 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CKS1BP61024 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
CKS1BP61024 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CKS1BP61024 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CKS1BP61024 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CKS1BP61024 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CKS1BP61024 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC14.06□□□□□ -0.16
CKS1BP61024 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CKS1BP61024 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
CKS1BP61024 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC14.06□□□□□ -0.16
CKS1BP61024 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
CKS1BP61024 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC14.06□□□□□ -0.16
CKS1BP61024 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CKS1BP61024 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CKS1BP61024 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
CKS1BP61024 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CKS1BP61024 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
CKS1BP61024 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CKS1BP61024 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
CKS1BP61024 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CKS1BP61024 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC14.06□□□□□ -0.16
CKS1BP61024 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CKS1BP61024 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC14.06□□□□□ -0.16
CKS1BP61024 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CKS1BP61024 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CKS1BP61024 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CKS1BP61024 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CKS1BP61024 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC14.06□□□□□ -0.16
CKS1BP61024 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CKS1BP61024 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC14.06□□□□□ -0.16
CKS1BP61024 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CKS1BP61024 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CKS1BP61024 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC14.05□□□□□ -0.16
CKS1BP61024 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CKS1BP61024 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CKS1BP61024 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
CKS1BP61024 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.05□□□□□ -0.16
CKS1BP61024 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CKS1BP61024 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CKS1BP61024 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC14.05□□□□□ -0.16
CKS1BP61024 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC14.05□□□□□ -0.16
CKS1BP61024 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CKS1BP61024 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
CKS1BP61024 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC14.05□□□□□ -0.16
CKS1BP61024 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
CKS1BP61024 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CKS1BP61024 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CKS1BP61024 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CKS1BP61024 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC14.05□□□□□ -0.16
CKS1BP61024 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CKS1BP61024 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CKS1BP61024 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CKS1BP61024 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CKS1BP61024 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CKS1BP61024 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CKS1BP61024 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CKS1BP61024 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CKS1BP61024 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CKS1BP61024 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
CKS1BP61024 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CKS1BP61024 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CKS1BP61024 AC004408.2-201ENST00000623613 2777 ntBASIC14.05□□□□□ -0.16
CKS1BP61024 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CKS1BP61024 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
CKS1BP61024 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CKS1BP61024 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms