Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CLDN6P56747 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CLDN6P56747 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.49■□□□□ 0.71
CLDN6P56747 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.49■□□□□ 0.71
CLDN6P56747 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLDN6P56747 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN6P56747 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN6P56747 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN6P56747 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.48■□□□□ 0.71
CLDN6P56747 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN6P56747 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.48■□□□□ 0.71
CLDN6P56747 AL355355.2-201ENST00000442321 338 ntBASIC19.48■□□□□ 0.71
CLDN6P56747 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN6P56747 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.48■□□□□ 0.71
CLDN6P56747 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.48■□□□□ 0.71
CLDN6P56747 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.48■□□□□ 0.71
CLDN6P56747 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.48■□□□□ 0.71
CLDN6P56747 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.48■□□□□ 0.71
CLDN6P56747 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN6P56747 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.48■□□□□ 0.71
CLDN6P56747 EP400NL-214ENST00000641289 2402 ntBASIC19.48■□□□□ 0.71
CLDN6P56747 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN6P56747 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN6P56747 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CLDN6P56747 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN6P56747 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN6P56747 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN6P56747 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.47■□□□□ 0.71
CLDN6P56747 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN6P56747 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN6P56747 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN6P56747 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN6P56747 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN6P56747 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN6P56747 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN6P56747 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
CLDN6P56747 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN6P56747 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN6P56747 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.47■□□□□ 0.71
CLDN6P56747 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.47■□□□□ 0.71
CLDN6P56747 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
CLDN6P56747 AF186192.3-201ENST00000583427 947 ntBASIC19.47■□□□□ 0.71
CLDN6P56747 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.47■□□□□ 0.71
CLDN6P56747 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.47■□□□□ 0.71
CLDN6P56747 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN6P56747 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CLDN6P56747 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN6P56747 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.47■□□□□ 0.71
CLDN6P56747 GUSBP5-202ENST00000510805 1989 ntBASIC19.46■□□□□ 0.71
CLDN6P56747 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN6P56747 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN6P56747 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN6P56747 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
CLDN6P56747 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN6P56747 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.46■□□□□ 0.71
CLDN6P56747 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CLDN6P56747 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.46■□□□□ 0.71
CLDN6P56747 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.46■□□□□ 0.71
CLDN6P56747 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.46■□□□□ 0.71
CLDN6P56747 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN6P56747 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN6P56747 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN6P56747 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CLDN6P56747 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN6P56747 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN6P56747 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN6P56747 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CLDN6P56747 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN6P56747 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN6P56747 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.45■□□□□ 0.7
CLDN6P56747 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN6P56747 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN6P56747 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN6P56747 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN6P56747 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.45■□□□□ 0.7
CLDN6P56747 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.45■□□□□ 0.7
CLDN6P56747 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.45■□□□□ 0.7
CLDN6P56747 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.45■□□□□ 0.7
CLDN6P56747 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN6P56747 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN6P56747 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.45■□□□□ 0.7
CLDN6P56747 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.45■□□□□ 0.7
CLDN6P56747 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.45■□□□□ 0.7
CLDN6P56747 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN6P56747 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN6P56747 CLDN5-201ENST00000403084 2357 ntBASIC19.44■□□□□ 0.7
CLDN6P56747 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CLDN6P56747 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CLDN6P56747 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.44■□□□□ 0.7
CLDN6P56747 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN6P56747 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN6P56747 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN6P56747 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN6P56747 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
CLDN6P56747 KRT18P57-201ENST00000443599 1254 ntBASIC19.44■□□□□ 0.7
CLDN6P56747 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.44■□□□□ 0.7
CLDN6P56747 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.44■□□□□ 0.7
CLDN6P56747 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.44■□□□□ 0.7
CLDN6P56747 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.44■□□□□ 0.7
CLDN6P56747 AL049597.2-201ENST00000565575 961 ntBASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms