Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDH12P55289 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CDH12P55289 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDH12P55289 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.79■□□□□ 0.6
CDH12P55289 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.79■□□□□ 0.6
CDH12P55289 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDH12P55289 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CDH12P55289 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDH12P55289 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDH12P55289 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDH12P55289 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDH12P55289 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDH12P55289 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.79■□□□□ 0.6
CDH12P55289 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.79■□□□□ 0.6
CDH12P55289 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDH12P55289 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CDH12P55289 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDH12P55289 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDH12P55289 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDH12P55289 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
CDH12P55289 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.78■□□□□ 0.6
CDH12P55289 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CDH12P55289 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CDH12P55289 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDH12P55289 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDH12P55289 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDH12P55289 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CDH12P55289 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CDH12P55289 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CDH12P55289 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.78■□□□□ 0.6
CDH12P55289 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.78■□□□□ 0.6
CDH12P55289 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDH12P55289 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
CDH12P55289 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDH12P55289 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDH12P55289 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.78■□□□□ 0.6
CDH12P55289 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDH12P55289 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDH12P55289 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CDH12P55289 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDH12P55289 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CDH12P55289 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.77■□□□□ 0.6
CDH12P55289 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDH12P55289 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDH12P55289 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.77■□□□□ 0.6
CDH12P55289 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDH12P55289 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CDH12P55289 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDH12P55289 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.77■□□□□ 0.6
CDH12P55289 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDH12P55289 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.77■□□□□ 0.6
CDH12P55289 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDH12P55289 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDH12P55289 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDH12P55289 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.77■□□□□ 0.6
CDH12P55289 KRT18P20-201ENST00000548986 1279 ntBASIC18.77■□□□□ 0.6
CDH12P55289 MIR2861-201ENST00000636310 90 ntBASIC18.77■□□□□ 0.6
CDH12P55289 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CDH12P55289 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDH12P55289 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDH12P55289 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.77■□□□□ 0.6
CDH12P55289 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDH12P55289 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDH12P55289 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDH12P55289 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDH12P55289 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
CDH12P55289 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CDH12P55289 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.77■□□□□ 0.59
CDH12P55289 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH12P55289 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CDH12P55289 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH12P55289 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH12P55289 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDH12P55289 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
CDH12P55289 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CDH12P55289 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH12P55289 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH12P55289 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.76■□□□□ 0.59
CDH12P55289 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDH12P55289 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH12P55289 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH12P55289 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.76■□□□□ 0.59
CDH12P55289 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH12P55289 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.76■□□□□ 0.59
CDH12P55289 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH12P55289 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.76■□□□□ 0.59
CDH12P55289 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.76■□□□□ 0.59
CDH12P55289 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH12P55289 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CDH12P55289 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.76■□□□□ 0.59
CDH12P55289 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.76■□□□□ 0.59
CDH12P55289 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.75■□□□□ 0.59
CDH12P55289 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDH12P55289 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH12P55289 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH12P55289 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH12P55289 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH12P55289 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
CDH12P55289 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.75■□□□□ 0.59
CDH12P55289 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms