Protein–RNA interactions for Protein: P52799

EFNB2, Ephrin-B2, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB2P52799 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
EFNB2P52799 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
EFNB2P52799 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EFNB2P52799 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EFNB2P52799 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EFNB2P52799 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
EFNB2P52799 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
EFNB2P52799 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.43■□□□□ 0.38
EFNB2P52799 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.43■□□□□ 0.38
EFNB2P52799 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
EFNB2P52799 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EFNB2P52799 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
EFNB2P52799 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
EFNB2P52799 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EFNB2P52799 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.43■□□□□ 0.38
EFNB2P52799 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
EFNB2P52799 MIR2861-201ENST00000636310 90 ntBASIC17.43■□□□□ 0.38
EFNB2P52799 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.43■□□□□ 0.38
EFNB2P52799 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
EFNB2P52799 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EFNB2P52799 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.43■□□□□ 0.38
EFNB2P52799 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.43■□□□□ 0.38
EFNB2P52799 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
EFNB2P52799 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EFNB2P52799 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
EFNB2P52799 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EFNB2P52799 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EFNB2P52799 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.43■□□□□ 0.38
EFNB2P52799 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EFNB2P52799 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.42■□□□□ 0.38
EFNB2P52799 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.42■□□□□ 0.38
EFNB2P52799 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
EFNB2P52799 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
EFNB2P52799 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.42■□□□□ 0.38
EFNB2P52799 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EFNB2P52799 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
EFNB2P52799 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
EFNB2P52799 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EFNB2P52799 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
EFNB2P52799 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC17.42■□□□□ 0.38
EFNB2P52799 DUX4L2-201ENST00000561772 1275 ntBASIC17.42■□□□□ 0.38
EFNB2P52799 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC17.42■□□□□ 0.38
EFNB2P52799 DUX4L6-201ENST00000626483 1275 ntBASIC17.42■□□□□ 0.38
EFNB2P52799 DUX4L1-201ENST00000627662 1275 ntBASIC17.42■□□□□ 0.38
EFNB2P52799 DUX4L8-201ENST00000629013 1275 ntBASIC17.42■□□□□ 0.38
EFNB2P52799 DUX4L3-201ENST00000630187 1275 ntBASIC17.42■□□□□ 0.38
EFNB2P52799 DUX4L7-201ENST00000630678 1275 ntBASIC17.42■□□□□ 0.38
EFNB2P52799 DUX4L5-201ENST00000630834 1275 ntBASIC17.42■□□□□ 0.38
EFNB2P52799 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EFNB2P52799 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
EFNB2P52799 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
EFNB2P52799 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
EFNB2P52799 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC17.42■□□□□ 0.38
EFNB2P52799 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EFNB2P52799 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
EFNB2P52799 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
EFNB2P52799 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.41■□□□□ 0.38
EFNB2P52799 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
EFNB2P52799 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EFNB2P52799 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EFNB2P52799 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
EFNB2P52799 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EFNB2P52799 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
EFNB2P52799 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
EFNB2P52799 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.41■□□□□ 0.38
EFNB2P52799 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
EFNB2P52799 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
EFNB2P52799 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC17.41■□□□□ 0.38
EFNB2P52799 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC17.41■□□□□ 0.38
EFNB2P52799 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
EFNB2P52799 KRT18P5-201ENST00000436075 1291 ntBASIC17.41■□□□□ 0.38
EFNB2P52799 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EFNB2P52799 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC17.41■□□□□ 0.38
EFNB2P52799 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC17.41■□□□□ 0.38
EFNB2P52799 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC17.41■□□□□ 0.38
EFNB2P52799 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EFNB2P52799 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC17.41■□□□□ 0.38
EFNB2P52799 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EFNB2P52799 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.41■□□□□ 0.38
EFNB2P52799 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EFNB2P52799 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EFNB2P52799 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
EFNB2P52799 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC17.41■□□□□ 0.38
EFNB2P52799 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EFNB2P52799 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.41■□□□□ 0.38
EFNB2P52799 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EFNB2P52799 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EFNB2P52799 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EFNB2P52799 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EFNB2P52799 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EFNB2P52799 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
EFNB2P52799 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EFNB2P52799 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.4■□□□□ 0.38
EFNB2P52799 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
EFNB2P52799 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EFNB2P52799 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
EFNB2P52799 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
EFNB2P52799 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC17.4■□□□□ 0.38
EFNB2P52799 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EFNB2P52799 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms