Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
RNF144AP50876 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.76■□□□□ 0.59
RNF144AP50876 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
RNF144AP50876 AC073111.5-205ENST00000641717 521 ntBASIC18.76■□□□□ 0.59
RNF144AP50876 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.76■□□□□ 0.59
RNF144AP50876 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.76■□□□□ 0.59
RNF144AP50876 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF144AP50876 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RNF144AP50876 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF144AP50876 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RNF144AP50876 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.76■□□□□ 0.59
RNF144AP50876 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.76■□□□□ 0.59
RNF144AP50876 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
RNF144AP50876 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF144AP50876 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF144AP50876 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF144AP50876 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.75■□□□□ 0.59
RNF144AP50876 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.75■□□□□ 0.59
RNF144AP50876 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF144AP50876 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF144AP50876 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.75■□□□□ 0.59
RNF144AP50876 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.75■□□□□ 0.59
RNF144AP50876 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF144AP50876 AL355472.2-201ENST00000422958 438 ntBASIC18.75■□□□□ 0.59
RNF144AP50876 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.75■□□□□ 0.59
RNF144AP50876 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.75■□□□□ 0.59
RNF144AP50876 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RNF144AP50876 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF144AP50876 AC092720.2-201ENST00000602388 1665 ntBASIC18.75■□□□□ 0.59
RNF144AP50876 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF144AP50876 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF144AP50876 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.75■□□□□ 0.59
RNF144AP50876 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF144AP50876 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF144AP50876 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.74■□□□□ 0.59
RNF144AP50876 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF144AP50876 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.74■□□□□ 0.59
RNF144AP50876 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF144AP50876 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF144AP50876 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF144AP50876 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.74■□□□□ 0.59
RNF144AP50876 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF144AP50876 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF144AP50876 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF144AP50876 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF144AP50876 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF144AP50876 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF144AP50876 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.74■□□□□ 0.59
RNF144AP50876 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF144AP50876 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.74■□□□□ 0.59
RNF144AP50876 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF144AP50876 AC092666.2-201ENST00000613287 246 ntBASIC18.74■□□□□ 0.59
RNF144AP50876 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
RNF144AP50876 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.74■□□□□ 0.59
RNF144AP50876 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF144AP50876 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF144AP50876 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF144AP50876 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF144AP50876 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF144AP50876 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF144AP50876 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF144AP50876 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF144AP50876 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.73■□□□□ 0.59
RNF144AP50876 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF144AP50876 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF144AP50876 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
RNF144AP50876 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.73■□□□□ 0.59
RNF144AP50876 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF144AP50876 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF144AP50876 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF144AP50876 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF144AP50876 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF144AP50876 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF144AP50876 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF144AP50876 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.73■□□□□ 0.59
RNF144AP50876 CDCA4P2-201ENST00000441182 718 ntBASIC18.73■□□□□ 0.59
RNF144AP50876 AC093787.1-201ENST00000450396 207 ntBASIC18.73■□□□□ 0.59
RNF144AP50876 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
RNF144AP50876 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
RNF144AP50876 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF144AP50876 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
RNF144AP50876 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF144AP50876 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.73■□□□□ 0.59
RNF144AP50876 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF144AP50876 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF144AP50876 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF144AP50876 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF144AP50876 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF144AP50876 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF144AP50876 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF144AP50876 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
RNF144AP50876 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.72■□□□□ 0.59
RNF144AP50876 AFG3L1P-217ENST00000557444 2447 ntBASIC18.72■□□□□ 0.59
RNF144AP50876 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.72■□□□□ 0.59
RNF144AP50876 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF144AP50876 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
RNF144AP50876 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
RNF144AP50876 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF144AP50876 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RNF144AP50876 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms