Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.18■□□□□ 0.66
PRIM2P49643 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.18■□□□□ 0.66
PRIM2P49643 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.18■□□□□ 0.66
PRIM2P49643 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
PRIM2P49643 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
PRIM2P49643 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.18■□□□□ 0.66
PRIM2P49643 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
PRIM2P49643 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.18■□□□□ 0.66
PRIM2P49643 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PRIM2P49643 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.18■□□□□ 0.66
PRIM2P49643 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.18■□□□□ 0.66
PRIM2P49643 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRIM2P49643 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRIM2P49643 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.18■□□□□ 0.66
PRIM2P49643 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRIM2P49643 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.17■□□□□ 0.66
PRIM2P49643 AC112907.3-201ENST00000577781 2400 ntBASIC19.17■□□□□ 0.66
PRIM2P49643 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRIM2P49643 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRIM2P49643 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.17■□□□□ 0.66
PRIM2P49643 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.17■□□□□ 0.66
PRIM2P49643 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.17■□□□□ 0.66
PRIM2P49643 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRIM2P49643 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRIM2P49643 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.17■□□□□ 0.66
PRIM2P49643 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
PRIM2P49643 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PRIM2P49643 AC091799.1-201ENST00000422823 811 ntBASIC19.17■□□□□ 0.66
PRIM2P49643 KRT18P11-201ENST00000435214 1283 ntBASIC19.17■□□□□ 0.66
PRIM2P49643 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.17■□□□□ 0.66
PRIM2P49643 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.17■□□□□ 0.66
PRIM2P49643 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.17■□□□□ 0.66
PRIM2P49643 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRIM2P49643 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.17■□□□□ 0.66
PRIM2P49643 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
PRIM2P49643 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PRIM2P49643 MIR5787-201ENST00000611784 55 ntBASIC19.17■□□□□ 0.66
PRIM2P49643 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.17■□□□□ 0.66
PRIM2P49643 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PRIM2P49643 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PRIM2P49643 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRIM2P49643 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.17■□□□□ 0.66
PRIM2P49643 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRIM2P49643 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.17■□□□□ 0.66
PRIM2P49643 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
PRIM2P49643 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.16■□□□□ 0.66
PRIM2P49643 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRIM2P49643 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
PRIM2P49643 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PRIM2P49643 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.16■□□□□ 0.66
PRIM2P49643 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRIM2P49643 AC007322.3-201ENST00000426526 701 ntBASIC19.16■□□□□ 0.66
PRIM2P49643 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.16■□□□□ 0.66
PRIM2P49643 KRT18P5-201ENST00000436075 1291 ntBASIC19.16■□□□□ 0.66
PRIM2P49643 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.16■□□□□ 0.66
PRIM2P49643 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRIM2P49643 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
PRIM2P49643 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.16■□□□□ 0.66
PRIM2P49643 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRIM2P49643 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRIM2P49643 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.16■□□□□ 0.66
PRIM2P49643 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
PRIM2P49643 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
PRIM2P49643 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRIM2P49643 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PRIM2P49643 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
PRIM2P49643 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRIM2P49643 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.15■□□□□ 0.66
PRIM2P49643 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRIM2P49643 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.15■□□□□ 0.66
PRIM2P49643 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRIM2P49643 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.15■□□□□ 0.66
PRIM2P49643 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.15■□□□□ 0.66
PRIM2P49643 CDV3P1-201ENST00000471403 739 ntBASIC19.15■□□□□ 0.66
PRIM2P49643 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
PRIM2P49643 AC137761.2-201ENST00000561729 223 ntBASIC19.15■□□□□ 0.66
PRIM2P49643 AC145350.3-201ENST00000569033 163 ntBASIC19.15■□□□□ 0.66
PRIM2P49643 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.15■□□□□ 0.66
PRIM2P49643 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.15■□□□□ 0.66
PRIM2P49643 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.15■□□□□ 0.66
PRIM2P49643 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PRIM2P49643 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
PRIM2P49643 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRIM2P49643 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PRIM2P49643 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PRIM2P49643 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
PRIM2P49643 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
PRIM2P49643 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.66
PRIM2P49643 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
PRIM2P49643 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PRIM2P49643 AFG3L1P-217ENST00000557444 2447 ntBASIC19.14■□□□□ 0.66
PRIM2P49643 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PRIM2P49643 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PRIM2P49643 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PRIM2P49643 AC099778.1-201ENST00000568593 1911 ntBASIC19.14■□□□□ 0.65
PRIM2P49643 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.14■□□□□ 0.65
PRIM2P49643 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PRIM2P49643 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
PRIM2P49643 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
PRIM2P49643 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms