Protein–RNA interactions for Protein: P39904

VPS52, Vacuolar protein sorting-associated protein 52, yeastyeast

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS52P39904 YBP1YBR216C 2025 nt1.93□□□□□ -2.1
VPS52P39904 UBR1YGR184C 5853 nt1.93□□□□□ -2.1
VPS52P39904 DFG16YOR030W 1860 nt1.93□□□□□ -2.1
VPS52P39904 GYP5YPL249C 2685 nt1.93□□□□□ -2.1
VPS52P39904 YML099W-AYML099W-A 330 nt1.93□□□□□ -2.1
VPS52P39904 YMR031W-AYMR031W-A 327 nt1.93□□□□□ -2.1
VPS52P39904 YMR193C-AYMR193C-A 387 nt1.93□□□□□ -2.1
VPS52P39904 COS111YBR203W 2775 nt1.93□□□□□ -2.1
VPS52P39904 PHS1YJL097W 654 nt1.92□□□□□ -2.1
VPS52P39904 RPS17AYML024W 411 nt1.92□□□□□ -2.1
VPS52P39904 DGR1YNL130C-A 147 nt1.92□□□□□ -2.1
VPS52P39904 RPL32YBL092W 393 nt1.92□□□□□ -2.1
VPS52P39904 YOR072W-AYOR072W-A 249 nt1.92□□□□□ -2.1
VPS52P39904 MF(ALPHA)1YPL187W 498 nt1.92□□□□□ -2.1
VPS52P39904 YHR214C-BYHR214C-B 5382 nt1.92□□□□□ -2.1
VPS52P39904 TUS1YLR425W 3924 nt1.92□□□□□ -2.1
VPS52P39904 MET18YIL128W 3099 nt1.92□□□□□ -2.1
VPS52P39904 UFD4YKL010C 4452 nt1.91□□□□□ -2.1
VPS52P39904 VMR1YHL035C 4779 nt1.91□□□□□ -2.1
VPS52P39904 YDR286CYDR286C 345 nt1.91□□□□□ -2.1
VPS52P39904 YER097WYER097W 330 nt1.91□□□□□ -2.1
VPS52P39904 YLR154W-AYLR154W-A 186 nt1.91□□□□□ -2.1
VPS52P39904 YOR333CYOR333C 417 nt1.91□□□□□ -2.1
VPS52P39904 snR36snR36 182 nt1.91□□□□□ -2.1
VPS52P39904 SET2YJL168C 2202 nt1.91□□□□□ -2.1
VPS52P39904 ELG1YOR144C 2376 nt1.91□□□□□ -2.1
VPS52P39904 SGO1YOR073W 1773 nt1.9□□□□□ -2.1
VPS52P39904 RKM1YPL208W 1752 nt1.9□□□□□ -2.1
VPS52P39904 YIL059CYIL059C 366 nt1.9□□□□□ -2.11
VPS52P39904 YIL115W-AYIL115W-A 372 nt1.9□□□□□ -2.11
VPS52P39904 RPA34YJL148W 702 nt1.9□□□□□ -2.11
VPS52P39904 YBL083CYBL083C 426 nt1.9□□□□□ -2.11
VPS52P39904 PAC1YOR269W 1485 nt1.89□□□□□ -2.11
VPS52P39904 SLM1YIL105C 2061 nt1.89□□□□□ -2.11
VPS52P39904 MNE1YOR350C 1992 nt1.89□□□□□ -2.11
VPS52P39904 YER181CYER181C 324 nt1.89□□□□□ -2.11
VPS52P39904 ZRG8YER033C 3231 nt1.89□□□□□ -2.11
VPS52P39904 YFR016CYFR016C 3702 nt1.89□□□□□ -2.11
VPS52P39904 PEX8YGR077C 1770 nt1.89□□□□□ -2.11
VPS52P39904 GUP1YGL084C 1683 nt1.89□□□□□ -2.11
VPS52P39904 VPH1YOR270C 2523 nt1.88□□□□□ -2.11
VPS52P39904 FAB1YFR019W 6837 nt1.88□□□□□ -2.11
VPS52P39904 YFL032WYFL032W 321 nt1.88□□□□□ -2.11
VPS52P39904 RPL39YJL189W 156 nt1.88□□□□□ -2.11
VPS52P39904 UBP2YOR124C 3819 nt1.88□□□□□ -2.11
VPS52P39904 YOR394C-AYOR394C-A 168 nt1.88□□□□□ -2.11
VPS52P39904 FKS1YLR342W 5631 nt1.88□□□□□ -2.11
VPS52P39904 NOP14YDL148C 2433 nt1.88□□□□□ -2.11
VPS52P39904 INO80YGL150C 4470 nt1.87□□□□□ -2.11
VPS52P39904 YOR093CYOR093C 4947 nt1.87□□□□□ -2.11
VPS52P39904 YER172C-AYER172C-A 381 nt1.87□□□□□ -2.11
VPS52P39904 HOP2YGL033W 657 nt1.87□□□□□ -2.11
VPS52P39904 YHR007C-AYHR007C-A 216 nt1.87□□□□□ -2.11
VPS52P39904 YHR071C-AYHR071C-A 321 nt1.87□□□□□ -2.11
VPS52P39904 HHT1YBR010W 411 nt1.87□□□□□ -2.11
VPS52P39904 GIP3YPL137C 3831 nt1.87□□□□□ -2.11
VPS52P39904 ATG11YPR049C 3537 nt1.87□□□□□ -2.11
VPS52P39904 YDR183C-AYDR183C-A 258 nt1.86□□□□□ -2.11
VPS52P39904 PRE4YFR050C 801 nt1.86□□□□□ -2.11
VPS52P39904 RPL42BYHR141C 321 nt1.86□□□□□ -2.11
VPS52P39904 RPL42AYNL162W 321 nt1.86□□□□□ -2.11
VPS52P39904 VPS34YLR240W 2628 nt1.86□□□□□ -2.11
VPS52P39904 IST2YBR086C 2841 nt1.85□□□□□ -2.11
VPS52P39904 YMR045CYMR045C 5268 nt1.85□□□□□ -2.11
VPS52P39904 YDR008CYDR008C 351 nt1.85□□□□□ -2.11
VPS52P39904 YDR169C-AYDR169C-A 150 nt1.85□□□□□ -2.11
VPS52P39904 YHL041WYHL041W 450 nt1.85□□□□□ -2.11
VPS52P39904 VPS8YAL002W 3825 nt1.85□□□□□ -2.11
VPS52P39904 YKL183C-AYKL183C-A 213 nt1.85□□□□□ -2.11
VPS52P39904 YLR255CYLR255C 354 nt1.85□□□□□ -2.11
VPS52P39904 YNL114CYNL114C 372 nt1.85□□□□□ -2.11
VPS52P39904 IRR1YIL026C 3453 nt1.85□□□□□ -2.11
VPS52P39904 GRR1YJR090C 3456 nt1.85□□□□□ -2.11
VPS52P39904 STE5YDR103W 2754 nt1.84□□□□□ -2.11
VPS52P39904 YCR043CYCR043C 384 nt1.84□□□□□ -2.11
VPS52P39904 RPL35AYDL191W 363 nt1.84□□□□□ -2.11
VPS52P39904 CSN9YDR179C 489 nt1.84□□□□□ -2.11
VPS52P39904 YLR146W-AYLR146W-A 189 nt1.84□□□□□ -2.11
VPS52P39904 TRL1YJL087C 2484 nt1.84□□□□□ -2.12
VPS52P39904 GCN2YDR283C 4980 nt1.83□□□□□ -2.12
VPS52P39904 EFR3YMR212C 2349 nt1.83□□□□□ -2.12
VPS52P39904 UBR2YLR024C 5619 nt1.83□□□□□ -2.12
VPS52P39904 SIR4YDR227W 4077 nt1.83□□□□□ -2.12
VPS52P39904 snR65snR65 100 nt1.83□□□□□ -2.12
VPS52P39904 YLR053CYLR053C 327 nt1.83□□□□□ -2.12
VPS52P39904 TAR1YLR154W-C 375 nt1.83□□□□□ -2.12
VPS52P39904 YOR231C-AYOR231C-A 201 nt1.83□□□□□ -2.12
VPS52P39904 SAR1YPL218W 573 nt1.83□□□□□ -2.12
VPS52P39904 AGC1YPR021C 2709 nt1.83□□□□□ -2.12
VPS52P39904 OSH6YKR003W 1347 nt1.83□□□□□ -2.12
VPS52P39904 NEO1YIL048W 3456 nt1.83□□□□□ -2.12
VPS52P39904 CDC60YPL160W 3273 nt1.83□□□□□ -2.12
VPS52P39904 YCR102W-AYCR102W-A 198 nt1.82□□□□□ -2.12
VPS52P39904 YDL062WYDL062W 426 nt1.82□□□□□ -2.12
VPS52P39904 YDL118WYDL118W 381 nt1.82□□□□□ -2.12
VPS52P39904 HTB2YBL002W 396 nt1.82□□□□□ -2.12
VPS52P39904 YBL012CYBL012C 402 nt1.82□□□□□ -2.12
VPS52P39904 RTT107YHR154W 3213 nt1.81□□□□□ -2.12
VPS52P39904 YDR341CYDR341C 1824 nt1.81□□□□□ -2.12
VPS52P39904 SWI6YLR182W 2412 nt1.8□□□□□ -2.12
Retrieved 100 of 7,029 protein–RNA pairs in 27.4 ms