Protein–RNA interactions for Protein: P39109

YCF1, Metal resistance protein YCF1, yeastyeast

Known RBP Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YCF1P39109 YBR206WYBR206W 324 nt-0.57□□□□□ -2.5
YCF1P39109 YCR038W-AYCR038W-A 126 nt-0.58□□□□□ -2.5
YCF1P39109 GRX8YLR364W 330 nt-0.58□□□□□ -2.5
YCF1P39109 PRP42YDR235W 1635 nt-0.58□□□□□ -2.5
YCF1P39109 EFR3YMR212C 2349 nt-0.58□□□□□ -2.5
YCF1P39109 ISD11YER048W-A 285 nt-0.59□□□□□ -2.5
YCF1P39109 YGR114CYGR114C 390 nt-0.59□□□□□ -2.5
YCF1P39109 YBR221W-AYBR221W-A 105 nt-0.59□□□□□ -2.5
YCF1P39109 TRS20YBR254C 528 nt-0.59□□□□□ -2.5
YCF1P39109 AIM44YPL158C 2277 nt-0.59□□□□□ -2.5
YCF1P39109 VPS52YDR484W 1926 nt-0.59□□□□□ -2.5
YCF1P39109 RMD5YDR255C 1266 nt-0.6□□□□□ -2.51
YCF1P39109 YDR509WYDR509W 348 nt-0.6□□□□□ -2.51
YCF1P39109 PFK27YOL136C 1194 nt-0.6□□□□□ -2.51
YCF1P39109 SBH2YER019C-A 267 nt-0.61□□□□□ -2.51
YCF1P39109 MIC19YFR011C 513 nt-0.62□□□□□ -2.51
YCF1P39109 BIG1YHR101C 1008 nt-0.62□□□□□ -2.51
YCF1P39109 YDR034C-CYDR034C-C 1317 nt-0.62□□□□□ -2.51
YCF1P39109 BFR2YDR299W 1605 nt-0.62□□□□□ -2.51
YCF1P39109 PET111YMR257C 2403 nt-0.62□□□□□ -2.51
YCF1P39109 snR84snR84 550 nt-0.63□□□□□ -2.51
YCF1P39109 COG7YGL005C 840 nt-0.63□□□□□ -2.51
YCF1P39109 RAD10YML095C 633 nt-0.63□□□□□ -2.51
YCF1P39109 YDL025W-AYDL025W-A 105 nt-0.64□□□□□ -2.51
YCF1P39109 SLD5YDR489W 885 nt-0.64□□□□□ -2.51
YCF1P39109 CCE1YKL011C 1062 nt-0.64□□□□□ -2.51
YCF1P39109 NME1NME1 340 nt-0.64□□□□□ -2.51
YCF1P39109 PTP2YOR208W 2253 nt-0.65□□□□□ -2.51
YCF1P39109 MIX23YBL107C 591 nt-0.65□□□□□ -2.51
YCF1P39109 FIG1YBR040W 897 nt-0.65□□□□□ -2.51
YCF1P39109 NPR2YEL062W 1848 nt-0.65□□□□□ -2.51
YCF1P39109 YCR043CYCR043C 384 nt-0.66□□□□□ -2.52
YCF1P39109 OCA6YDR067C 675 nt-0.66□□□□□ -2.52
YCF1P39109 VMA21YGR105W 234 nt-0.66□□□□□ -2.52
YCF1P39109 YIR030W-AYIR030W-A 384 nt-0.66□□□□□ -2.52
YCF1P39109 CUL3YGR003W 2235 nt-0.67□□□□□ -2.52
YCF1P39109 RPC25YKL144C 639 nt-0.67□□□□□ -2.52
YCF1P39109 ERV15YBR210W 429 nt-0.67□□□□□ -2.52
YCF1P39109 STO1YMR125W 2586 nt-0.68□□□□□ -2.52
YCF1P39109 RCO1YMR075W 2055 nt-0.68□□□□□ -2.52
YCF1P39109 YOR169CYOR169C 465 nt-0.69□□□□□ -2.52
YCF1P39109 YOR282WYOR282W 321 nt-0.69□□□□□ -2.52
YCF1P39109 RPS10AYOR293W 318 nt-0.69□□□□□ -2.52
YCF1P39109 REF2YDR195W 1602 nt-0.69□□□□□ -2.52
YCF1P39109 ECM25YJL201W 1800 nt-0.69□□□□□ -2.52
YCF1P39109 YEL073CYEL073C 324 nt-0.69□□□□□ -2.52
YCF1P39109 snR8snR8 190 nt-0.7□□□□□ -2.52
YCF1P39109 ERV14YGL054C 417 nt-0.7□□□□□ -2.52
YCF1P39109 DPB11YJL090C 2295 nt-0.71□□□□□ -2.52
YCF1P39109 SPO77YLR341W 1434 nt-0.71□□□□□ -2.52
YCF1P39109 YOR105WYOR105W 327 nt-0.71□□□□□ -2.52
YCF1P39109 PDE2YOR360C 1581 nt-0.71□□□□□ -2.52
YCF1P39109 snR35snR35 204 nt-0.71□□□□□ -2.52
YCF1P39109 YBR224WYBR224W 516 nt-0.71□□□□□ -2.52
YCF1P39109 RFX1YLR176C 2436 nt-0.72□□□□□ -2.52
YCF1P39109 YLR101CYLR101C 396 nt-0.72□□□□□ -2.52
YCF1P39109 YBL068W-AYBL068W-A 237 nt-0.72□□□□□ -2.52
YCF1P39109 IZH4YOL101C 939 nt-0.72□□□□□ -2.52
YCF1P39109 YHL009W-BYHL009W-B 5409 nt-0.72□□□□□ -2.52
YCF1P39109 RPM2YML091C 3609 nt-0.72□□□□□ -2.52
YCF1P39109 RRT16YNL105W 429 nt-0.73□□□□□ -2.53
YCF1P39109 NOP12YOL041C 1380 nt-0.73□□□□□ -2.53
YCF1P39109 TMA20YER007C-A 546 nt-0.74□□□□□ -2.53
YCF1P39109 YCL020WYCL020W 1317 nt-0.74□□□□□ -2.53
YCF1P39109 TIM13YGR181W 318 nt-0.74□□□□□ -2.53
YCF1P39109 YJR011CYJR011C 786 nt-0.74□□□□□ -2.53
YCF1P39109 BET5YML077W 480 nt-0.74□□□□□ -2.53
YCF1P39109 YFL002W-BYFL002W-B 1317 nt-0.75□□□□□ -2.53
YCF1P39109 YGR161W-AYGR161W-A 1317 nt-0.75□□□□□ -2.53
YCF1P39109 YLR410W-AYLR410W-A 1317 nt-0.75□□□□□ -2.53
YCF1P39109 YMR173W-AYMR173W-A 1185 nt-0.75□□□□□ -2.53
YCF1P39109 DDR48YMR173W 1293 nt-0.75□□□□□ -2.53
YCF1P39109 YHR212CYHR212C 336 nt-0.76□□□□□ -2.53
YCF1P39109 YJL127W-AYJL127W-A 117 nt-0.76□□□□□ -2.53
YCF1P39109 YAR060CYAR060C 336 nt-0.76□□□□□ -2.53
YCF1P39109 ASE1YOR058C 2658 nt-0.76□□□□□ -2.53
YCF1P39109 tT(UGU)G1tT(UGU)G1 72 nt-0.77□□□□□ -2.53
YCF1P39109 tT(UGU)G2tT(UGU)G2 72 nt-0.77□□□□□ -2.53
YCF1P39109 tT(UGU)PtT(UGU)P 72 nt-0.77□□□□□ -2.53
YCF1P39109 YCR022CYCR022C 345 nt-0.78□□□□□ -2.53
YCF1P39109 CGI121YML036W 546 nt-0.78□□□□□ -2.53
YCF1P39109 SOV1YMR066W 2697 nt-0.78□□□□□ -2.53
YCF1P39109 HOT13YKL084W 351 nt-0.79□□□□□ -2.54
YCF1P39109 MCM10YIL150C 1716 nt-0.79□□□□□ -2.54
YCF1P39109 PMP1YCR024C-A 123 nt-0.8□□□□□ -2.54
YCF1P39109 YBL100W-AYBL100W-A 1317 nt-0.8□□□□□ -2.54
YCF1P39109 YBL094CYBL094C 333 nt-0.81□□□□□ -2.54
YCF1P39109 YOR186C-AYOR186C-A 210 nt-0.81□□□□□ -2.54
YCF1P39109 snR68snR68 136 nt-0.82□□□□□ -2.54
YCF1P39109 YGR265WYGR265W 411 nt-0.82□□□□□ -2.54
YCF1P39109 COX5BYIL111W 456 nt-0.82□□□□□ -2.54
YCF1P39109 YAL064WYAL064W 285 nt-0.82□□□□□ -2.54
YCF1P39109 TAP42YMR028W 1101 nt-0.82□□□□□ -2.54
YCF1P39109 NOC3YLR002C 1992 nt-0.84□□□□□ -2.54
YCF1P39109 NFU1YKL040C 771 nt-0.85□□□□□ -2.55
YCF1P39109 YOP1YPR028W 543 nt-0.85□□□□□ -2.55
YCF1P39109 RPS7BYNL096C 573 nt-0.86□□□□□ -2.55
YCF1P39109 YOL024WYOL024W 519 nt-0.86□□□□□ -2.55
YCF1P39109 MUM2YBR057C 1101 nt-0.86□□□□□ -2.55
YCF1P39109 AME1YBR211C 975 nt-0.86□□□□□ -2.55
Retrieved 100 of 7,029 protein–RNA pairs in 48.8 ms