Protein–RNA interactions for Protein: P38287

CSH1, Mannosyl phosphorylinositol ceramide synthase CSH1, yeastyeast

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CSH1P38287 NUP120YKL057C 3114 nt0.63□□□□□ -2.31
CSH1P38287 YJR140W-AYJR140W-A 150 nt0.63□□□□□ -2.31
CSH1P38287 YLR217WYLR217W 324 nt0.63□□□□□ -2.31
CSH1P38287 YPR147CYPR147C 915 nt0.63□□□□□ -2.31
CSH1P38287 NUT2YPR168W 474 nt0.63□□□□□ -2.31
CSH1P38287 YBR200W-AYBR200W-A 165 nt0.63□□□□□ -2.31
CSH1P38287 AIM9YER080W 1884 nt0.63□□□□□ -2.31
CSH1P38287 SHE9YDR393W 1371 nt0.62□□□□□ -2.31
CSH1P38287 CYC7YEL039C 342 nt0.62□□□□□ -2.31
CSH1P38287 YER158W-AYER158W-A 216 nt0.62□□□□□ -2.31
CSH1P38287 YGL109WYGL109W 324 nt0.62□□□□□ -2.31
CSH1P38287 YLR366WYLR366W 306 nt0.62□□□□□ -2.31
CSH1P38287 YPR159C-AYPR159C-A 102 nt0.62□□□□□ -2.31
CSH1P38287 SWI5YDR146C 2130 nt0.61□□□□□ -2.31
CSH1P38287 NHP2YDL208W 471 nt0.61□□□□□ -2.31
CSH1P38287 TAD1YGL243W 1203 nt0.61□□□□□ -2.31
CSH1P38287 YGR045CYGR045C 363 nt0.61□□□□□ -2.31
CSH1P38287 tT(UGU)Q1tT(UGU)Q1 76 nt0.61□□□□□ -2.31
CSH1P38287 VPS52YDR484W 1926 nt0.6□□□□□ -2.31
CSH1P38287 snR79snR79 84 nt0.6□□□□□ -2.31
CSH1P38287 YDR521WYDR521W 336 nt0.6□□□□□ -2.31
CSH1P38287 RSM27YGR215W 333 nt0.6□□□□□ -2.31
CSH1P38287 YKL111CYKL111C 336 nt0.6□□□□□ -2.31
CSH1P38287 YBL029C-AYBL029C-A 285 nt0.6□□□□□ -2.31
CSH1P38287 YMR304C-AYMR304C-A 351 nt0.6□□□□□ -2.31
CSH1P38287 YDL206WYDL206W 2289 nt0.59□□□□□ -2.31
CSH1P38287 SEC1YDR164C 2175 nt0.59□□□□□ -2.31
CSH1P38287 YIR021W-AYIR021W-A 213 nt0.59□□□□□ -2.31
CSH1P38287 PIG1YLR273C 1947 nt0.58□□□□□ -2.32
CSH1P38287 COX7YMR256C 183 nt0.58□□□□□ -2.32
CSH1P38287 YPL197CYPL197C 414 nt0.58□□□□□ -2.32
CSH1P38287 YOP1YPR028W 543 nt0.58□□□□□ -2.32
CSH1P38287 NUP157YER105C 4176 nt0.58□□□□□ -2.32
CSH1P38287 BI4Q0120 1917 nt0.58□□□□□ -2.32
CSH1P38287 YDR114CYDR114C 303 nt0.57□□□□□ -2.32
CSH1P38287 TIM10YHR005C-A 282 nt0.57□□□□□ -2.32
CSH1P38287 CMC4YMR194C-B 222 nt0.57□□□□□ -2.32
CSH1P38287 YBR221W-AYBR221W-A 105 nt0.57□□□□□ -2.32
CSH1P38287 UBP3YER151C 2739 nt0.56□□□□□ -2.32
CSH1P38287 YDL152WYDL152W 366 nt0.56□□□□□ -2.32
CSH1P38287 YFR057WYFR057W 456 nt0.56□□□□□ -2.32
CSH1P38287 YMR031W-AYMR031W-A 327 nt0.56□□□□□ -2.32
CSH1P38287 YBR071WYBR071W 636 nt0.56□□□□□ -2.32
CSH1P38287 UBS1YBR165W 834 nt0.56□□□□□ -2.32
CSH1P38287 YHR028W-AYHR028W-A 321 nt0.55□□□□□ -2.32
CSH1P38287 tT(AGU)BtT(AGU)B 73 nt0.55□□□□□ -2.32
CSH1P38287 tT(AGU)CtT(AGU)C 73 nt0.55□□□□□ -2.32
CSH1P38287 tT(AGU)DtT(AGU)D 73 nt0.55□□□□□ -2.32
CSH1P38287 tT(AGU)HtT(AGU)H 73 nt0.55□□□□□ -2.32
CSH1P38287 tT(AGU)I1tT(AGU)I1 73 nt0.55□□□□□ -2.32
CSH1P38287 tT(AGU)I2tT(AGU)I2 73 nt0.55□□□□□ -2.32
CSH1P38287 tT(AGU)JtT(AGU)J 73 nt0.55□□□□□ -2.32
CSH1P38287 tT(AGU)N1tT(AGU)N1 73 nt0.55□□□□□ -2.32
CSH1P38287 tT(AGU)N2tT(AGU)N2 73 nt0.55□□□□□ -2.32
CSH1P38287 tT(AGU)O1tT(AGU)O1 73 nt0.55□□□□□ -2.32
CSH1P38287 tT(AGU)O2tT(AGU)O2 73 nt0.55□□□□□ -2.32
CSH1P38287 YIL142C-AYIL142C-A 333 nt0.55□□□□□ -2.32
CSH1P38287 SET3YKR029C 2256 nt0.54□□□□□ -2.32
CSH1P38287 GPM2YDL021W 936 nt0.54□□□□□ -2.32
CSH1P38287 SRP14YDL092W 441 nt0.54□□□□□ -2.32
CSH1P38287 YDR003W-AYDR003W-A 123 nt0.54□□□□□ -2.32
CSH1P38287 MXR1YER042W 555 nt0.54□□□□□ -2.32
CSH1P38287 YHR054CYHR054C 1065 nt0.54□□□□□ -2.32
CSH1P38287 LRP1YHR081W 555 nt0.54□□□□□ -2.32
CSH1P38287 TMA22YJR014W 597 nt0.54□□□□□ -2.32
CSH1P38287 YPT6YLR262C 648 nt0.54□□□□□ -2.32
CSH1P38287 YMR272W-AYMR272W-A 114 nt0.54□□□□□ -2.32
CSH1P38287 YPR170CYPR170C 336 nt0.54□□□□□ -2.32
CSH1P38287 FIG4YNL325C 2640 nt0.53□□□□□ -2.32
CSH1P38287 PDE2YOR360C 1581 nt0.53□□□□□ -2.32
CSH1P38287 YDR509WYDR509W 348 nt0.53□□□□□ -2.32
CSH1P38287 CWC23YGL128C 852 nt0.53□□□□□ -2.32
CSH1P38287 YGR115CYGR115C 780 nt0.53□□□□□ -2.32
CSH1P38287 YMR013C-AYMR013C-A 150 nt0.53□□□□□ -2.32
CSH1P38287 YOR199WYOR199W 330 nt0.53□□□□□ -2.32
CSH1P38287 YLL007CYLL007C 1998 nt0.53□□□□□ -2.32
CSH1P38287 MMS4YBR098W 2076 nt0.53□□□□□ -2.32
CSH1P38287 YER138W-AYER138W-A 105 nt0.52□□□□□ -2.33
CSH1P38287 SDH2YLL041C 801 nt0.52□□□□□ -2.33
CSH1P38287 YNL146C-AYNL146C-A 195 nt0.52□□□□□ -2.33
CSH1P38287 YBL107W-AYBL107W-A 105 nt0.52□□□□□ -2.33
CSH1P38287 YBR032WYBR032W 303 nt0.52□□□□□ -2.33
CSH1P38287 SCW11YGL028C 1629 nt0.52□□□□□ -2.33
CSH1P38287 HNT1YDL125C 477 nt0.51□□□□□ -2.33
CSH1P38287 YDR220CYDR220C 294 nt0.51□□□□□ -2.33
CSH1P38287 YEL018C-AYEL018C-A 534 nt0.51□□□□□ -2.33
CSH1P38287 PRE4YFR050C 801 nt0.51□□□□□ -2.33
CSH1P38287 YGL015CYGL015C 393 nt0.51□□□□□ -2.33
CSH1P38287 ALG13YGL047W 609 nt0.51□□□□□ -2.33
CSH1P38287 YGL230CYGL230C 444 nt0.51□□□□□ -2.33
CSH1P38287 PAM16YJL104W 450 nt0.51□□□□□ -2.33
CSH1P38287 APL2YKL135C 2181 nt0.51□□□□□ -2.33
CSH1P38287 STO1YMR125W 2586 nt0.51□□□□□ -2.33
CSH1P38287 YMR175W-AYMR175W-A 195 nt0.51□□□□□ -2.33
CSH1P38287 MKT1YNL085W 2493 nt0.51□□□□□ -2.33
CSH1P38287 SLM6YBR266C 453 nt0.51□□□□□ -2.33
CSH1P38287 AI5_ALPHAQ0070 1893 nt0.5□□□□□ -2.33
CSH1P38287 YML009C-AYML009C-A 327 nt0.5□□□□□ -2.33
CSH1P38287 IES4YOR189W 351 nt0.5□□□□□ -2.33
CSH1P38287 KAR1YNL188W 1302 nt0.49□□□□□ -2.33
Retrieved 100 of 7,029 protein–RNA pairs in 43.5 ms