Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.87■□□□□ 0.61
CHMP24386 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHMP24386 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.87■□□□□ 0.61
CHMP24386 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CHMP24386 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.87■□□□□ 0.61
CHMP24386 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.87■□□□□ 0.61
CHMP24386 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CHMP24386 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHMP24386 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.87■□□□□ 0.61
CHMP24386 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.87■□□□□ 0.61
CHMP24386 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHMP24386 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CHMP24386 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
CHMP24386 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHMP24386 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.86■□□□□ 0.61
CHMP24386 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CHMP24386 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHMP24386 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.86■□□□□ 0.61
CHMP24386 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CHMP24386 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CHMP24386 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.86■□□□□ 0.61
CHMP24386 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHMP24386 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CHMP24386 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHMP24386 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.86■□□□□ 0.61
CHMP24386 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.86■□□□□ 0.61
CHMP24386 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.86■□□□□ 0.61
CHMP24386 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.86■□□□□ 0.61
CHMP24386 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.86■□□□□ 0.61
CHMP24386 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHMP24386 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.86■□□□□ 0.61
CHMP24386 AC099778.1-201ENST00000568593 1911 ntBASIC18.86■□□□□ 0.61
CHMP24386 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CHMP24386 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHMP24386 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHMP24386 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHMP24386 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.85■□□□□ 0.61
CHMP24386 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHMP24386 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.85■□□□□ 0.61
CHMP24386 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CHMP24386 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.85■□□□□ 0.61
CHMP24386 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CHMP24386 AC005181.1-201ENST00000604782 1256 ntBASIC18.85■□□□□ 0.61
CHMP24386 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.85■□□□□ 0.61
CHMP24386 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.85■□□□□ 0.61
CHMP24386 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHMP24386 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.85■□□□□ 0.61
CHMP24386 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHMP24386 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CHMP24386 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.85■□□□□ 0.61
CHMP24386 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHMP24386 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CHMP24386 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHMP24386 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CHMP24386 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.84■□□□□ 0.61
CHMP24386 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHMP24386 MIR663A-201ENST00000385250 93 ntBASIC18.84■□□□□ 0.61
CHMP24386 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.84■□□□□ 0.61
CHMP24386 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.84■□□□□ 0.61
CHMP24386 AC245052.3-201ENST00000450182 901 ntBASIC18.84■□□□□ 0.61
CHMP24386 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.84■□□□□ 0.61
CHMP24386 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHMP24386 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHMP24386 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHMP24386 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHMP24386 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CHMP24386 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHMP24386 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHMP24386 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.84■□□□□ 0.61
CHMP24386 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.83■□□□□ 0.61
CHMP24386 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CHMP24386 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CHMP24386 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHMP24386 NCF1B-203ENST00000435988 1254 ntBASIC18.83■□□□□ 0.6
CHMP24386 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHMP24386 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.83■□□□□ 0.6
CHMP24386 AL162412.1-201ENST00000567129 965 ntBASIC18.83■□□□□ 0.6
CHMP24386 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.6
CHMP24386 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CHMP24386 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHMP24386 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHMP24386 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
CHMP24386 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
CHMP24386 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHMP24386 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHMP24386 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP24386 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.82■□□□□ 0.6
CHMP24386 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP24386 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP24386 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP24386 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP24386 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.82■□□□□ 0.6
CHMP24386 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP24386 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
CHMP24386 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.82■□□□□ 0.6
CHMP24386 HLA-L-209ENST00000420110 1011 ntBASIC18.82■□□□□ 0.6
CHMP24386 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.82■□□□□ 0.6
CHMP24386 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.82■□□□□ 0.6
CHMP24386 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.82■□□□□ 0.6
CHMP24386 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms