Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB3BP20337 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.67■□□□□ 0.42
RAB3BP20337 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB3BP20337 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.67■□□□□ 0.42
RAB3BP20337 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB3BP20337 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
RAB3BP20337 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB3BP20337 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
RAB3BP20337 PTMA-205ENST00000410064 814 ntTSL 2 BASIC17.67■□□□□ 0.42
RAB3BP20337 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RAB3BP20337 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB3BP20337 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.67■□□□□ 0.42
RAB3BP20337 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB3BP20337 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.67■□□□□ 0.42
RAB3BP20337 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB3BP20337 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB3BP20337 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.67■□□□□ 0.42
RAB3BP20337 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.67■□□□□ 0.42
RAB3BP20337 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB3BP20337 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB3BP20337 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB3BP20337 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB3BP20337 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB3BP20337 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB3BP20337 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB3BP20337 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RAB3BP20337 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.66■□□□□ 0.42
RAB3BP20337 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB3BP20337 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RAB3BP20337 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC17.66■□□□□ 0.42
RAB3BP20337 IGHV3-19-201ENST00000521488 291 ntBASIC17.66■□□□□ 0.42
RAB3BP20337 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RAB3BP20337 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RAB3BP20337 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.66■□□□□ 0.42
RAB3BP20337 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB3BP20337 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RAB3BP20337 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB3BP20337 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.66■□□□□ 0.42
RAB3BP20337 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RAB3BP20337 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RAB3BP20337 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB3BP20337 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.66■□□□□ 0.42
RAB3BP20337 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.66■□□□□ 0.42
RAB3BP20337 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB3BP20337 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB3BP20337 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB3BP20337 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB3BP20337 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB3BP20337 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.65■□□□□ 0.42
RAB3BP20337 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC17.65■□□□□ 0.42
RAB3BP20337 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RAB3BP20337 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RAB3BP20337 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
RAB3BP20337 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC17.65■□□□□ 0.42
RAB3BP20337 AC093484.2-201ENST00000580996 2166 ntBASIC17.65■□□□□ 0.42
RAB3BP20337 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
RAB3BP20337 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RAB3BP20337 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RAB3BP20337 AC126544.1-201ENST00000580842 1059 ntBASIC17.65■□□□□ 0.42
RAB3BP20337 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC17.65■□□□□ 0.42
RAB3BP20337 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC17.65■□□□□ 0.42
RAB3BP20337 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
RAB3BP20337 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
RAB3BP20337 AC120498.9-201ENST00000339021 3867 ntBASIC17.65■□□□□ 0.42
RAB3BP20337 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.65■□□□□ 0.42
RAB3BP20337 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB3BP20337 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB3BP20337 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RAB3BP20337 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB3BP20337 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RAB3BP20337 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB3BP20337 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB3BP20337 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB3BP20337 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
RAB3BP20337 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB3BP20337 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
RAB3BP20337 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
RAB3BP20337 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RAB3BP20337 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.64■□□□□ 0.42
RAB3BP20337 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB3BP20337 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB3BP20337 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
RAB3BP20337 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB3BP20337 AL691432.2-201ENST00000607222 2038 ntBASIC17.64■□□□□ 0.41
RAB3BP20337 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.64■□□□□ 0.41
RAB3BP20337 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RAB3BP20337 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RAB3BP20337 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB3BP20337 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB3BP20337 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC17.64■□□□□ 0.41
RAB3BP20337 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC17.64■□□□□ 0.41
RAB3BP20337 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.64■□□□□ 0.41
RAB3BP20337 TRIR-202ENST00000588213 841 ntTSL 3 BASIC17.64■□□□□ 0.41
RAB3BP20337 MIR4466-201ENST00000606121 54 ntBASIC17.64■□□□□ 0.41
RAB3BP20337 AC105233.4-201ENST00000642045 216 ntBASIC17.64■□□□□ 0.41
RAB3BP20337 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.64■□□□□ 0.41
RAB3BP20337 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB3BP20337 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
RAB3BP20337 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RAB3BP20337 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms