Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
KRT4P19013 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.26■□□□□ 0.83
KRT4P19013 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KRT4P19013 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KRT4P19013 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
KRT4P19013 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
KRT4P19013 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.25■□□□□ 0.83
KRT4P19013 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.25■□□□□ 0.83
KRT4P19013 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KRT4P19013 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KRT4P19013 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.25■□□□□ 0.83
KRT4P19013 PBX2P1-201ENST00000493219 1291 ntBASIC20.25■□□□□ 0.83
KRT4P19013 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.25■□□□□ 0.83
KRT4P19013 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.25■□□□□ 0.83
KRT4P19013 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.25■□□□□ 0.83
KRT4P19013 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.25■□□□□ 0.83
KRT4P19013 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KRT4P19013 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.25■□□□□ 0.83
KRT4P19013 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KRT4P19013 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KRT4P19013 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KRT4P19013 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
KRT4P19013 KRT87P-202ENST00000534226 1464 ntBASIC20.24■□□□□ 0.83
KRT4P19013 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
KRT4P19013 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
KRT4P19013 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.24■□□□□ 0.83
KRT4P19013 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KRT4P19013 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.24■□□□□ 0.83
KRT4P19013 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KRT4P19013 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
KRT4P19013 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.24■□□□□ 0.83
KRT4P19013 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
KRT4P19013 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
KRT4P19013 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KRT4P19013 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KRT4P19013 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.24■□□□□ 0.83
KRT4P19013 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.24■□□□□ 0.83
KRT4P19013 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.24■□□□□ 0.83
KRT4P19013 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
KRT4P19013 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
KRT4P19013 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
KRT4P19013 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
KRT4P19013 RASA4CP-201ENST00000424092 1398 ntBASIC20.23■□□□□ 0.83
KRT4P19013 DPP3P2-201ENST00000416030 1696 ntBASIC20.23■□□□□ 0.83
KRT4P19013 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
KRT4P19013 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.23■□□□□ 0.83
KRT4P19013 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KRT4P19013 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
KRT4P19013 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.23■□□□□ 0.83
KRT4P19013 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.23■□□□□ 0.83
KRT4P19013 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.23■□□□□ 0.83
KRT4P19013 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
KRT4P19013 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.23■□□□□ 0.83
KRT4P19013 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
KRT4P19013 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.23■□□□□ 0.83
KRT4P19013 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.23■□□□□ 0.83
KRT4P19013 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KRT4P19013 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KRT4P19013 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.23■□□□□ 0.83
KRT4P19013 TMEM179-206ENST00000616017 1645 ntBASIC20.23■□□□□ 0.83
KRT4P19013 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
KRT4P19013 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.23■□□□□ 0.83
KRT4P19013 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
KRT4P19013 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KRT4P19013 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.22■□□□□ 0.83
KRT4P19013 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
KRT4P19013 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
KRT4P19013 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.22■□□□□ 0.83
KRT4P19013 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.22■□□□□ 0.83
KRT4P19013 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
KRT4P19013 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.22■□□□□ 0.83
KRT4P19013 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KRT4P19013 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KRT4P19013 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.22■□□□□ 0.83
KRT4P19013 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.22■□□□□ 0.83
KRT4P19013 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
KRT4P19013 AC079140.4-201ENST00000507448 529 ntBASIC20.22■□□□□ 0.83
KRT4P19013 AC138907.5-202ENST00000569484 235 ntBASIC20.22■□□□□ 0.83
KRT4P19013 AC120498.10-201ENST00000621827 505 ntBASIC20.22■□□□□ 0.83
KRT4P19013 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.22■□□□□ 0.83
KRT4P19013 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KRT4P19013 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.22■□□□□ 0.83
KRT4P19013 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KRT4P19013 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KRT4P19013 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KRT4P19013 AC005332.7-201ENST00000614046 2005 ntBASIC20.22■□□□□ 0.83
KRT4P19013 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.22■□□□□ 0.83
KRT4P19013 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KRT4P19013 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KRT4P19013 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.22■□□□□ 0.83
KRT4P19013 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KRT4P19013 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.22■□□□□ 0.83
KRT4P19013 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
KRT4P19013 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.21■□□□□ 0.83
KRT4P19013 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KRT4P19013 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
KRT4P19013 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.21■□□□□ 0.83
KRT4P19013 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.21■□□□□ 0.83
KRT4P19013 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KRT4P19013 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms