Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DOBP13765 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DOBP13765 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DOBP13765 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
HLA-DOBP13765 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DOBP13765 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DOBP13765 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DOBP13765 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.14■□□□□ 0.49
HLA-DOBP13765 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.14■□□□□ 0.49
HLA-DOBP13765 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.14■□□□□ 0.49
HLA-DOBP13765 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.14■□□□□ 0.49
HLA-DOBP13765 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.14■□□□□ 0.49
HLA-DOBP13765 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.14■□□□□ 0.49
HLA-DOBP13765 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.14■□□□□ 0.49
HLA-DOBP13765 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.14■□□□□ 0.49
HLA-DOBP13765 AC069236.1-201ENST00000604339 616 ntBASIC18.14■□□□□ 0.49
HLA-DOBP13765 RAP2CP1-201ENST00000605103 478 ntBASIC18.14■□□□□ 0.49
HLA-DOBP13765 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DOBP13765 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DOBP13765 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
HLA-DOBP13765 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DOBP13765 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DOBP13765 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
HLA-DOBP13765 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.14■□□□□ 0.49
HLA-DOBP13765 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DOBP13765 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DOBP13765 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DOBP13765 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DOBP13765 SLC25A24-204ENST00000569674 2357 ntBASIC18.13■□□□□ 0.49
HLA-DOBP13765 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DOBP13765 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.13■□□□□ 0.49
HLA-DOBP13765 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DOBP13765 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DOBP13765 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DOBP13765 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.13■□□□□ 0.49
HLA-DOBP13765 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DOBP13765 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.13■□□□□ 0.49
HLA-DOBP13765 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DOBP13765 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
HLA-DOBP13765 AL355472.2-201ENST00000422958 438 ntBASIC18.13■□□□□ 0.49
HLA-DOBP13765 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
HLA-DOBP13765 AC093787.1-201ENST00000450396 207 ntBASIC18.13■□□□□ 0.49
HLA-DOBP13765 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DOBP13765 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
HLA-DOBP13765 AC008694.1-202ENST00000636953 945 ntBASIC18.13■□□□□ 0.49
HLA-DOBP13765 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.13■□□□□ 0.49
HLA-DOBP13765 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.13■□□□□ 0.49
HLA-DOBP13765 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
HLA-DOBP13765 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DOBP13765 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.13■□□□□ 0.49
HLA-DOBP13765 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DOBP13765 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
HLA-DOBP13765 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
HLA-DOBP13765 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-DOBP13765 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-DOBP13765 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
HLA-DOBP13765 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
HLA-DOBP13765 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
HLA-DOBP13765 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
HLA-DOBP13765 MCRIP2P1-201ENST00000394346 511 ntBASIC18.12■□□□□ 0.49
HLA-DOBP13765 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-DOBP13765 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.12■□□□□ 0.49
HLA-DOBP13765 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.12■□□□□ 0.49
HLA-DOBP13765 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.12■□□□□ 0.49
HLA-DOBP13765 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
HLA-DOBP13765 AC100791.3-201ENST00000617619 330 ntBASIC18.12■□□□□ 0.49
HLA-DOBP13765 AL050303.2-201ENST00000619798 666 ntBASIC18.12■□□□□ 0.49
HLA-DOBP13765 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.12■□□□□ 0.49
HLA-DOBP13765 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-DOBP13765 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-DOBP13765 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.12■□□□□ 0.49
HLA-DOBP13765 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-DOBP13765 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.12■□□□□ 0.49
HLA-DOBP13765 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-DOBP13765 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-DOBP13765 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.12■□□□□ 0.49
HLA-DOBP13765 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.11■□□□□ 0.49
HLA-DOBP13765 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.11■□□□□ 0.49
HLA-DOBP13765 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DOBP13765 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.11■□□□□ 0.49
HLA-DOBP13765 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DOBP13765 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.11■□□□□ 0.49
HLA-DOBP13765 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DOBP13765 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
HLA-DOBP13765 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DOBP13765 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DOBP13765 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DOBP13765 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DOBP13765 PGM5P4-201ENST00000421970 445 ntBASIC18.11■□□□□ 0.49
HLA-DOBP13765 AC026185.1-201ENST00000445748 174 ntBASIC18.11■□□□□ 0.49
HLA-DOBP13765 AC092666.2-201ENST00000613287 246 ntBASIC18.11■□□□□ 0.49
HLA-DOBP13765 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DOBP13765 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.11■□□□□ 0.49
HLA-DOBP13765 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.11■□□□□ 0.49
HLA-DOBP13765 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DOBP13765 DPP3P2-201ENST00000416030 1696 ntBASIC18.11■□□□□ 0.49
HLA-DOBP13765 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DOBP13765 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.11■□□□□ 0.49
HLA-DOBP13765 AC099778.1-201ENST00000568593 1911 ntBASIC18.11■□□□□ 0.49
HLA-DOBP13765 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms