Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC35.73■■■■□ 3.31
TOP2AP11388 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC35.73■■■■□ 3.31
TOP2AP11388 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC35.73■■■■□ 3.31
TOP2AP11388 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC35.73■■■■□ 3.31
TOP2AP11388 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC35.73■■■■□ 3.31
TOP2AP11388 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC35.73■■■■□ 3.31
TOP2AP11388 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC35.73■■■■□ 3.31
TOP2AP11388 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC35.73■■■■□ 3.31
TOP2AP11388 NIFKP9-201ENST00000419265 221 ntBASIC35.73■■■■□ 3.31
TOP2AP11388 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC35.73■■■■□ 3.31
TOP2AP11388 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC35.72■■■■□ 3.31
TOP2AP11388 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC35.72■■■■□ 3.31
TOP2AP11388 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC35.72■■■■□ 3.31
TOP2AP11388 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC35.72■■■■□ 3.31
TOP2AP11388 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC35.72■■■■□ 3.31
TOP2AP11388 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC35.72■■■■□ 3.31
TOP2AP11388 AC113347.1-201ENST00000413321 391 ntBASIC35.72■■■■□ 3.31
TOP2AP11388 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC35.72■■■■□ 3.31
TOP2AP11388 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC35.72■■■■□ 3.31
TOP2AP11388 RBM42-202ENST00000586618 771 ntTSL 3 BASIC35.72■■■■□ 3.31
TOP2AP11388 AC092865.7-201ENST00000641832 219 ntBASIC35.72■■■■□ 3.31
TOP2AP11388 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC35.71■■■■□ 3.31
TOP2AP11388 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC35.71■■■■□ 3.31
TOP2AP11388 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC35.71■■■■□ 3.31
TOP2AP11388 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC35.71■■■■□ 3.31
TOP2AP11388 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC35.71■■■■□ 3.31
TOP2AP11388 PNN-205ENST00000556530 601 ntTSL 2 BASIC35.71■■■■□ 3.31
TOP2AP11388 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC35.71■■■■□ 3.31
TOP2AP11388 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC35.71■■■■□ 3.31
TOP2AP11388 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC35.71■■■■□ 3.31
TOP2AP11388 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC35.71■■■■□ 3.31
TOP2AP11388 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC35.7■■■■□ 3.31
TOP2AP11388 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC35.7■■■■□ 3.31
TOP2AP11388 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC35.7■■■■□ 3.31
TOP2AP11388 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC35.7■■■■□ 3.31
TOP2AP11388 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC35.7■■■■□ 3.31
TOP2AP11388 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC35.7■■■■□ 3.31
TOP2AP11388 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC35.7■■■■□ 3.31
TOP2AP11388 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC35.7■■■■□ 3.3
TOP2AP11388 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC35.69■■■■□ 3.3
TOP2AP11388 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC35.69■■■■□ 3.3
TOP2AP11388 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC35.69■■■■□ 3.3
TOP2AP11388 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC35.69■■■■□ 3.3
TOP2AP11388 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC35.69■■■■□ 3.3
TOP2AP11388 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC35.69■■■■□ 3.3
TOP2AP11388 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC35.68■■■■□ 3.3
TOP2AP11388 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC35.68■■■■□ 3.3
TOP2AP11388 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC35.68■■■■□ 3.3
TOP2AP11388 GLDC-219ENST00000640208 420 ntTSL 2 BASIC35.68■■■■□ 3.3
TOP2AP11388 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC35.68■■■■□ 3.3
TOP2AP11388 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC35.68■■■■□ 3.3
TOP2AP11388 AC233723.2-201ENST00000623798 2106 ntBASIC35.68■■■■□ 3.3
TOP2AP11388 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC35.68■■■■□ 3.3
TOP2AP11388 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC35.67■■■■□ 3.3
TOP2AP11388 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC35.67■■■■□ 3.3
TOP2AP11388 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC35.67■■■■□ 3.3
TOP2AP11388 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC35.67■■■■□ 3.3
TOP2AP11388 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC35.67■■■■□ 3.3
TOP2AP11388 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC35.67■■■■□ 3.3
TOP2AP11388 AL031963.3-201ENST00000606441 850 ntBASIC35.67■■■■□ 3.3
TOP2AP11388 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC35.67■■■■□ 3.3
TOP2AP11388 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC35.67■■■■□ 3.3
TOP2AP11388 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC35.67■■■■□ 3.3
TOP2AP11388 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC35.67■■■■□ 3.3
TOP2AP11388 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC35.67■■■■□ 3.3
TOP2AP11388 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC35.67■■■■□ 3.3
TOP2AP11388 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC35.67■■■■□ 3.3
TOP2AP11388 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC35.67■■■■□ 3.3
TOP2AP11388 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC35.67■■■■□ 3.3
TOP2AP11388 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC35.66■■■■□ 3.3
TOP2AP11388 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC35.66■■■■□ 3.3
TOP2AP11388 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC35.66■■■■□ 3.3
TOP2AP11388 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
TOP2AP11388 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
TOP2AP11388 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC35.66■■■■□ 3.3
TOP2AP11388 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
TOP2AP11388 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
TOP2AP11388 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC35.66■■■■□ 3.3
TOP2AP11388 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC35.65■■■■□ 3.3
TOP2AP11388 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC35.65■■■■□ 3.3
TOP2AP11388 UNC93B2-201ENST00000285383 730 ntBASIC35.65■■■■□ 3.3
TOP2AP11388 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC35.65■■■■□ 3.3
TOP2AP11388 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC35.65■■■■□ 3.3
TOP2AP11388 AL390955.1-201ENST00000428694 934 ntBASIC35.65■■■■□ 3.3
TOP2AP11388 AC116562.2-201ENST00000507042 360 ntBASIC35.65■■■■□ 3.3
TOP2AP11388 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC35.65■■■■□ 3.3
TOP2AP11388 DUT-205ENST00000558813 769 ntTSL 2 BASIC35.65■■■■□ 3.3
TOP2AP11388 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC35.65■■■■□ 3.3
TOP2AP11388 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC35.64■■■■□ 3.3
TOP2AP11388 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC35.64■■■■□ 3.3
TOP2AP11388 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC35.64■■■■□ 3.3
TOP2AP11388 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC35.64■■■■□ 3.3
TOP2AP11388 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC35.64■■■■□ 3.3
TOP2AP11388 AC244015.2-201ENST00000616358 1861 ntBASIC35.64■■■■□ 3.3
TOP2AP11388 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC35.64■■■■□ 3.3
TOP2AP11388 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC35.64■■■■□ 3.3
TOP2AP11388 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC35.63■■■■□ 3.29
TOP2AP11388 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC35.63■■■■□ 3.29
TOP2AP11388 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC35.63■■■■□ 3.29
TOP2AP11388 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC35.63■■■■□ 3.29
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms