Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC15.82■□□□□ 0.12
CD28P10747 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CD28P10747 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC15.82■□□□□ 0.12
CD28P10747 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CD28P10747 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CD28P10747 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CD28P10747 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CD28P10747 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD28P10747 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CD28P10747 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CD28P10747 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD28P10747 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD28P10747 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CD28P10747 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC15.82■□□□□ 0.12
CD28P10747 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD28P10747 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD28P10747 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD28P10747 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
CD28P10747 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD28P10747 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD28P10747 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CD28P10747 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CD28P10747 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CD28P10747 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CD28P10747 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CD28P10747 AL390719.1-204ENST00000412397 1219 ntBASIC15.81■□□□□ 0.12
CD28P10747 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD28P10747 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC15.81■□□□□ 0.12
CD28P10747 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC15.81■□□□□ 0.12
CD28P10747 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CD28P10747 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC15.81■□□□□ 0.12
CD28P10747 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC15.81■□□□□ 0.12
CD28P10747 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CD28P10747 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC15.81■□□□□ 0.12
CD28P10747 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC15.81■□□□□ 0.12
CD28P10747 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC15.81■□□□□ 0.12
CD28P10747 AC005829.2-201ENST00000571422 1056 ntBASIC15.81■□□□□ 0.12
CD28P10747 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
CD28P10747 AC244015.2-201ENST00000616358 1861 ntBASIC15.81■□□□□ 0.12
CD28P10747 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CD28P10747 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD28P10747 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD28P10747 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD28P10747 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CD28P10747 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CD28P10747 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CD28P10747 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD28P10747 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD28P10747 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD28P10747 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CD28P10747 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD28P10747 PARN-205ENST00000539279 1557 ntTSL 2 BASIC15.8■□□□□ 0.12
CD28P10747 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC15.8■□□□□ 0.12
CD28P10747 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD28P10747 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD28P10747 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CD28P10747 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC15.8■□□□□ 0.12
CD28P10747 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CD28P10747 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CD28P10747 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CD28P10747 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
CD28P10747 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD28P10747 ISG20-202ENST00000379224 540 ntTSL 3 BASIC15.8■□□□□ 0.12
CD28P10747 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CD28P10747 ABHD17AP6-201ENST00000458502 1044 ntBASIC15.8■□□□□ 0.12
CD28P10747 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
CD28P10747 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CD28P10747 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC15.8■□□□□ 0.12
CD28P10747 Z99916.2-201ENST00000604037 246 ntBASIC15.8■□□□□ 0.12
CD28P10747 AC120498.8-201ENST00000614275 531 ntBASIC15.8■□□□□ 0.12
CD28P10747 FBXW4P1-201ENST00000426721 2239 ntBASIC15.8■□□□□ 0.12
CD28P10747 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
CD28P10747 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CD28P10747 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD28P10747 STK25-205ENST00000405883 1904 ntTSL 2 BASIC15.8■□□□□ 0.12
CD28P10747 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD28P10747 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD28P10747 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD28P10747 MOK-233ENST00000524214 1539 ntTSL 2 BASIC15.79■□□□□ 0.12
CD28P10747 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD28P10747 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC15.79■□□□□ 0.12
CD28P10747 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CD28P10747 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC15.79■□□□□ 0.12
CD28P10747 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CD28P10747 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD28P10747 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD28P10747 AC011484.1-201ENST00000377652 1995 ntBASIC15.79■□□□□ 0.12
CD28P10747 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC15.79■□□□□ 0.12
CD28P10747 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD28P10747 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CD28P10747 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD28P10747 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CD28P10747 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CD28P10747 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CD28P10747 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
CD28P10747 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC15.79■□□□□ 0.12
CD28P10747 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD28P10747 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC15.79■□□□□ 0.12
CD28P10747 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CD28P10747 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms