Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SNRPA1P09661 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SNRPA1P09661 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SNRPA1P09661 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SNRPA1P09661 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC25.9■■□□□ 1.74
SNRPA1P09661 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC25.9■■□□□ 1.74
SNRPA1P09661 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SNRPA1P09661 AL049637.2-201ENST00000641778 930 ntBASIC25.9■■□□□ 1.74
SNRPA1P09661 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC25.9■■□□□ 1.74
SNRPA1P09661 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC25.9■■□□□ 1.74
SNRPA1P09661 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
SNRPA1P09661 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
SNRPA1P09661 AL135905.2-201ENST00000584934 1404 ntBASIC25.89■■□□□ 1.74
SNRPA1P09661 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC25.89■■□□□ 1.74
SNRPA1P09661 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.74
SNRPA1P09661 AC124283.5-201ENST00000624661 1809 ntBASIC25.89■■□□□ 1.74
SNRPA1P09661 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
SNRPA1P09661 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
SNRPA1P09661 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC25.89■■□□□ 1.74
SNRPA1P09661 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC25.89■■□□□ 1.74
SNRPA1P09661 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC25.89■■□□□ 1.74
SNRPA1P09661 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC25.89■■□□□ 1.74
SNRPA1P09661 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC25.89■■□□□ 1.74
SNRPA1P09661 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC25.89■■□□□ 1.74
SNRPA1P09661 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC25.89■■□□□ 1.74
SNRPA1P09661 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC25.89■■□□□ 1.73
SNRPA1P09661 PLK5-205ENST00000642079 1969 ntBASIC25.89■■□□□ 1.73
SNRPA1P09661 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
SNRPA1P09661 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC25.88■■□□□ 1.73
SNRPA1P09661 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC25.88■■□□□ 1.73
SNRPA1P09661 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC25.88■■□□□ 1.73
SNRPA1P09661 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
SNRPA1P09661 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
SNRPA1P09661 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC25.88■■□□□ 1.73
SNRPA1P09661 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
SNRPA1P09661 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC25.88■■□□□ 1.73
SNRPA1P09661 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
SNRPA1P09661 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC25.88■■□□□ 1.73
SNRPA1P09661 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC25.88■■□□□ 1.73
SNRPA1P09661 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC25.88■■□□□ 1.73
SNRPA1P09661 RARRES2P10-201ENST00000564312 460 ntBASIC25.88■■□□□ 1.73
SNRPA1P09661 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC25.88■■□□□ 1.73
SNRPA1P09661 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
SNRPA1P09661 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
SNRPA1P09661 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC25.88■■□□□ 1.73
SNRPA1P09661 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC25.87■■□□□ 1.73
SNRPA1P09661 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
SNRPA1P09661 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC25.87■■□□□ 1.73
SNRPA1P09661 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC25.87■■□□□ 1.73
SNRPA1P09661 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC25.87■■□□□ 1.73
SNRPA1P09661 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC25.87■■□□□ 1.73
SNRPA1P09661 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
SNRPA1P09661 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC25.87■■□□□ 1.73
SNRPA1P09661 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC25.87■■□□□ 1.73
SNRPA1P09661 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
SNRPA1P09661 TSPY7P-201ENST00000431358 1114 ntBASIC25.87■■□□□ 1.73
SNRPA1P09661 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC25.87■■□□□ 1.73
SNRPA1P09661 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
SNRPA1P09661 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC25.87■■□□□ 1.73
SNRPA1P09661 MAX-217ENST00000557277 728 ntTSL 3 BASIC25.87■■□□□ 1.73
SNRPA1P09661 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC25.87■■□□□ 1.73
SNRPA1P09661 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC25.87■■□□□ 1.73
SNRPA1P09661 AP001412.1-201ENST00000608405 714 ntBASIC25.87■■□□□ 1.73
SNRPA1P09661 Six3os1_6.1-201ENST00000620790 196 ntBASIC25.87■■□□□ 1.73
SNRPA1P09661 CABP2-204ENST00000636477 941 ntTSL 5 BASIC25.87■■□□□ 1.73
SNRPA1P09661 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
SNRPA1P09661 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC25.87■■□□□ 1.73
SNRPA1P09661 PTBP1P-201ENST00000554374 1601 ntBASIC25.87■■□□□ 1.73
SNRPA1P09661 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
SNRPA1P09661 ERF-202ENST00000440177 2032 ntTSL 2 BASIC25.87■■□□□ 1.73
SNRPA1P09661 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SNRPA1P09661 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SNRPA1P09661 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
SNRPA1P09661 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
SNRPA1P09661 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC25.86■■□□□ 1.73
SNRPA1P09661 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC25.86■■□□□ 1.73
SNRPA1P09661 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.73
SNRPA1P09661 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC25.86■■□□□ 1.73
SNRPA1P09661 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC25.86■■□□□ 1.73
SNRPA1P09661 GXYLT1P3-201ENST00000453058 1193 ntBASIC25.86■■□□□ 1.73
SNRPA1P09661 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC25.86■■□□□ 1.73
SNRPA1P09661 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC25.86■■□□□ 1.73
SNRPA1P09661 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
SNRPA1P09661 AC073912.3-201ENST00000624414 853 ntBASIC25.86■■□□□ 1.73
SNRPA1P09661 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC25.86■■□□□ 1.73
SNRPA1P09661 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC25.86■■□□□ 1.73
SNRPA1P09661 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC25.86■■□□□ 1.73
SNRPA1P09661 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
SNRPA1P09661 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC25.85■■□□□ 1.73
SNRPA1P09661 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
SNRPA1P09661 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
SNRPA1P09661 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC25.85■■□□□ 1.73
SNRPA1P09661 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SNRPA1P09661 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC25.85■■□□□ 1.73
SNRPA1P09661 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
SNRPA1P09661 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SNRPA1P09661 AL121603.2-201ENST00000557373 2117 ntBASIC25.85■■□□□ 1.73
SNRPA1P09661 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SNRPA1P09661 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC25.85■■□□□ 1.73
SNRPA1P09661 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC25.85■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms