Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
ERCC1P07992 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ERCC1P07992 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.87■□□□□ 0.45
ERCC1P07992 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
ERCC1P07992 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
ERCC1P07992 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.87■□□□□ 0.45
ERCC1P07992 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
ERCC1P07992 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ERCC1P07992 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ERCC1P07992 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.87■□□□□ 0.45
ERCC1P07992 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
ERCC1P07992 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ERCC1P07992 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ERCC1P07992 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ERCC1P07992 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ERCC1P07992 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ERCC1P07992 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ERCC1P07992 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
ERCC1P07992 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
ERCC1P07992 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ERCC1P07992 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.86■□□□□ 0.45
ERCC1P07992 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC17.86■□□□□ 0.45
ERCC1P07992 AF201337.1-201ENST00000520239 748 ntBASIC17.86■□□□□ 0.45
ERCC1P07992 SLC7A5P2-201ENST00000553010 536 ntBASIC17.86■□□□□ 0.45
ERCC1P07992 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.86■□□□□ 0.45
ERCC1P07992 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.86■□□□□ 0.45
ERCC1P07992 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
ERCC1P07992 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
ERCC1P07992 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
ERCC1P07992 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.86■□□□□ 0.45
ERCC1P07992 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ERCC1P07992 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ERCC1P07992 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.86■□□□□ 0.45
ERCC1P07992 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ERCC1P07992 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ERCC1P07992 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.86■□□□□ 0.45
ERCC1P07992 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ERCC1P07992 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ERCC1P07992 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ERCC1P07992 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ERCC1P07992 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
ERCC1P07992 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ERCC1P07992 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ERCC1P07992 AC011484.1-201ENST00000377652 1995 ntBASIC17.85■□□□□ 0.45
ERCC1P07992 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
ERCC1P07992 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.85■□□□□ 0.45
ERCC1P07992 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
ERCC1P07992 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ERCC1P07992 AC007322.4-201ENST00000509611 723 ntBASIC17.85■□□□□ 0.45
ERCC1P07992 AC083906.2-201ENST00000511578 360 ntBASIC17.85■□□□□ 0.45
ERCC1P07992 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
ERCC1P07992 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.85■□□□□ 0.45
ERCC1P07992 AC007952.6-201ENST00000573168 2673 ntBASIC17.85■□□□□ 0.45
ERCC1P07992 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ERCC1P07992 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ERCC1P07992 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.85■□□□□ 0.45
ERCC1P07992 AC003957.1-201ENST00000625108 2673 ntBASIC17.85■□□□□ 0.45
ERCC1P07992 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
ERCC1P07992 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ERCC1P07992 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ERCC1P07992 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.84■□□□□ 0.45
ERCC1P07992 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ERCC1P07992 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
ERCC1P07992 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
ERCC1P07992 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ERCC1P07992 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
ERCC1P07992 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.84■□□□□ 0.45
ERCC1P07992 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.84■□□□□ 0.45
ERCC1P07992 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ERCC1P07992 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ERCC1P07992 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
ERCC1P07992 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.84■□□□□ 0.45
ERCC1P07992 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ERCC1P07992 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.84■□□□□ 0.45
ERCC1P07992 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ERCC1P07992 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.84■□□□□ 0.45
ERCC1P07992 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.84■□□□□ 0.45
ERCC1P07992 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
ERCC1P07992 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ERCC1P07992 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.84■□□□□ 0.45
ERCC1P07992 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.84■□□□□ 0.45
ERCC1P07992 FP700111.2-201ENST00000619190 1892 ntBASIC17.84■□□□□ 0.45
ERCC1P07992 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.84■□□□□ 0.45
ERCC1P07992 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ERCC1P07992 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.84■□□□□ 0.45
ERCC1P07992 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
ERCC1P07992 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
ERCC1P07992 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
ERCC1P07992 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
ERCC1P07992 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ERCC1P07992 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
ERCC1P07992 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.83■□□□□ 0.44
ERCC1P07992 AC133552.2-202ENST00000575694 574 ntBASIC17.83■□□□□ 0.44
ERCC1P07992 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.83■□□□□ 0.44
ERCC1P07992 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.44
ERCC1P07992 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.83■□□□□ 0.44
ERCC1P07992 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
ERCC1P07992 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.83■□□□□ 0.44
ERCC1P07992 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ERCC1P07992 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms