Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TCRAP04437 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TCRAP04437 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TCRAP04437 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TCRAP04437 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TCRAP04437 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TCRAP04437 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
TCRAP04437 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TCRAP04437 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TCRAP04437 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TCRAP04437 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TCRAP04437 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC15.35■□□□□ 0.05
TCRAP04437 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TCRAP04437 AC005332.7-201ENST00000614046 2005 ntBASIC15.35■□□□□ 0.05
TCRAP04437 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TCRAP04437 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC15.35■□□□□ 0.05
TCRAP04437 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TCRAP04437 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TCRAP04437 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TCRAP04437 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC15.35■□□□□ 0.05
TCRAP04437 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC15.35■□□□□ 0.05
TCRAP04437 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC15.35■□□□□ 0.05
TCRAP04437 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TCRAP04437 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TCRAP04437 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
TCRAP04437 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC15.35■□□□□ 0.05
TCRAP04437 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TCRAP04437 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TCRAP04437 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC15.35■□□□□ 0.05
TCRAP04437 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TCRAP04437 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TCRAP04437 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TCRAP04437 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TCRAP04437 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TCRAP04437 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
TCRAP04437 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TCRAP04437 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC15.35■□□□□ 0.05
TCRAP04437 KRT16P2-201ENST00000414673 1423 ntBASIC15.34■□□□□ 0.05
TCRAP04437 POLI-202ENST00000406285 2030 ntTSL 2 BASIC15.34■□□□□ 0.05
TCRAP04437 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TCRAP04437 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
TCRAP04437 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC15.34■□□□□ 0.05
TCRAP04437 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC15.34■□□□□ 0.05
TCRAP04437 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TCRAP04437 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TCRAP04437 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC15.34■□□□□ 0.05
TCRAP04437 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC15.34■□□□□ 0.05
TCRAP04437 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC15.34■□□□□ 0.05
TCRAP04437 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
TCRAP04437 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
TCRAP04437 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
TCRAP04437 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TCRAP04437 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TCRAP04437 AL136116.3-201ENST00000402907 1138 ntBASIC15.34■□□□□ 0.05
TCRAP04437 AC099791.1-201ENST00000416440 715 ntBASIC15.34■□□□□ 0.05
TCRAP04437 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC15.34■□□□□ 0.05
TCRAP04437 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
TCRAP04437 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC15.34■□□□□ 0.05
TCRAP04437 AL136162.1-201ENST00000607711 1078 ntBASIC15.34■□□□□ 0.05
TCRAP04437 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TCRAP04437 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TCRAP04437 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC15.34■□□□□ 0.05
TCRAP04437 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TCRAP04437 AL691432.2-201ENST00000607222 2038 ntBASIC15.34■□□□□ 0.05
TCRAP04437 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC15.34■□□□□ 0.05
TCRAP04437 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TCRAP04437 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TCRAP04437 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TCRAP04437 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
TCRAP04437 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC15.34■□□□□ 0.05
TCRAP04437 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC15.34■□□□□ 0.05
TCRAP04437 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TCRAP04437 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
TCRAP04437 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC15.33■□□□□ 0.05
TCRAP04437 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
TCRAP04437 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
TCRAP04437 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
TCRAP04437 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC15.33■□□□□ 0.05
TCRAP04437 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC15.33■□□□□ 0.05
TCRAP04437 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TCRAP04437 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC15.33■□□□□ 0.05
TCRAP04437 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC15.33■□□□□ 0.04
TCRAP04437 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TCRAP04437 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TCRAP04437 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TCRAP04437 MIR572-201ENST00000384983 95 ntBASIC15.33■□□□□ 0.04
TCRAP04437 AC135279.3-201ENST00000610945 1311 ntBASIC15.33■□□□□ 0.04
TCRAP04437 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
TCRAP04437 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TCRAP04437 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TCRAP04437 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TCRAP04437 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
TCRAP04437 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC15.33■□□□□ 0.04
TCRAP04437 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TCRAP04437 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC15.33■□□□□ 0.04
TCRAP04437 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC15.33■□□□□ 0.04
TCRAP04437 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TCRAP04437 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
TCRAP04437 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC15.33■□□□□ 0.04
TCRAP04437 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms