Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC12.75□□□□□ -0.37
APOBP04114 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
APOBP04114 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC12.75□□□□□ -0.37
APOBP04114 AL359075.1-203ENST00000462729 1002 ntBASIC12.75□□□□□ -0.37
APOBP04114 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC12.75□□□□□ -0.37
APOBP04114 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
APOBP04114 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC12.75□□□□□ -0.37
APOBP04114 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC12.75□□□□□ -0.37
APOBP04114 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
APOBP04114 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
APOBP04114 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC12.75□□□□□ -0.37
APOBP04114 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
APOBP04114 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC12.75□□□□□ -0.37
APOBP04114 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
APOBP04114 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
APOBP04114 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
APOBP04114 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
APOBP04114 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC12.75□□□□□ -0.37
APOBP04114 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
APOBP04114 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC12.74□□□□□ -0.37
APOBP04114 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC12.74□□□□□ -0.37
APOBP04114 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
APOBP04114 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
APOBP04114 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC12.74□□□□□ -0.37
APOBP04114 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC12.74□□□□□ -0.37
APOBP04114 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
APOBP04114 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
APOBP04114 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
APOBP04114 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
APOBP04114 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC12.74□□□□□ -0.37
APOBP04114 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
APOBP04114 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC12.74□□□□□ -0.37
APOBP04114 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC12.74□□□□□ -0.37
APOBP04114 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
APOBP04114 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
APOBP04114 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC12.74□□□□□ -0.37
APOBP04114 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
APOBP04114 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC12.74□□□□□ -0.37
APOBP04114 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
APOBP04114 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
APOBP04114 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
APOBP04114 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
APOBP04114 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC12.73□□□□□ -0.37
APOBP04114 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC12.73□□□□□ -0.37
APOBP04114 AP000550.4-202ENST00000639755 178 ntBASIC12.73□□□□□ -0.37
APOBP04114 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
APOBP04114 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC12.73□□□□□ -0.37
APOBP04114 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC12.73□□□□□ -0.37
APOBP04114 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
APOBP04114 AC008040.2-201ENST00000461049 708 ntBASIC12.73□□□□□ -0.37
APOBP04114 AC026271.3-201ENST00000571884 352 ntBASIC12.73□□□□□ -0.37
APOBP04114 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOBP04114 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
APOBP04114 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC12.73□□□□□ -0.37
APOBP04114 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOBP04114 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
APOBP04114 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC12.73□□□□□ -0.37
APOBP04114 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC12.73□□□□□ -0.37
APOBP04114 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOBP04114 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOBP04114 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC12.73□□□□□ -0.37
APOBP04114 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
APOBP04114 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
APOBP04114 TSPY14P-201ENST00000303979 915 ntBASIC12.72□□□□□ -0.37
APOBP04114 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
APOBP04114 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC12.72□□□□□ -0.37
APOBP04114 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
APOBP04114 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
APOBP04114 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
APOBP04114 ECEL1P2-202ENST00000465689 757 ntBASIC12.72□□□□□ -0.37
APOBP04114 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
APOBP04114 ME2-206ENST00000638410 2289 ntTSL 5 BASIC12.72□□□□□ -0.37
APOBP04114 ME2-210ENST00000639255 2262 ntTSL 5 BASIC12.72□□□□□ -0.37
APOBP04114 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
APOBP04114 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
APOBP04114 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC12.72□□□□□ -0.37
APOBP04114 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
APOBP04114 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC12.72□□□□□ -0.37
APOBP04114 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
APOBP04114 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
APOBP04114 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
APOBP04114 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC12.72□□□□□ -0.37
APOBP04114 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
APOBP04114 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
APOBP04114 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
APOBP04114 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC12.71□□□□□ -0.37
APOBP04114 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
APOBP04114 AC117947.1-201ENST00000427448 529 ntBASIC12.71□□□□□ -0.37
APOBP04114 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC12.71□□□□□ -0.37
APOBP04114 B3GAT3P1-201ENST00000471720 806 ntBASIC12.71□□□□□ -0.37
APOBP04114 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC12.71□□□□□ -0.37
APOBP04114 NAPSB-206ENST00000562112 1266 ntBASIC12.71□□□□□ -0.37
APOBP04114 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
APOBP04114 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC12.71□□□□□ -0.37
APOBP04114 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC12.71□□□□□ -0.37
APOBP04114 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
APOBP04114 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
APOBP04114 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC12.71□□□□□ -0.37
APOBP04114 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
APOBP04114 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms