Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
COL1A1P02452 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
COL1A1P02452 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
COL1A1P02452 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
COL1A1P02452 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
COL1A1P02452 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
COL1A1P02452 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
COL1A1P02452 ABHD17AP6-201ENST00000458502 1044 ntBASIC24.51■■□□□ 1.51
COL1A1P02452 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC24.51■■□□□ 1.51
COL1A1P02452 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
COL1A1P02452 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
COL1A1P02452 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
COL1A1P02452 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
COL1A1P02452 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
COL1A1P02452 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
COL1A1P02452 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
COL1A1P02452 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
COL1A1P02452 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
COL1A1P02452 MIR1224-201ENST00000408193 85 ntBASIC24.5■■□□□ 1.51
COL1A1P02452 LY6E-205ENST00000519611 635 ntTSL 3 BASIC24.5■■□□□ 1.51
COL1A1P02452 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC24.5■■□□□ 1.51
COL1A1P02452 REXO2-216ENST00000544196 452 ntTSL 3 BASIC24.5■■□□□ 1.51
COL1A1P02452 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC24.5■■□□□ 1.51
COL1A1P02452 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
COL1A1P02452 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC24.5■■□□□ 1.51
COL1A1P02452 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
COL1A1P02452 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
COL1A1P02452 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
COL1A1P02452 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
COL1A1P02452 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
COL1A1P02452 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC24.49■■□□□ 1.51
COL1A1P02452 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
COL1A1P02452 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
COL1A1P02452 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
COL1A1P02452 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
COL1A1P02452 AC239809.2-201ENST00000415381 517 ntBASIC24.49■■□□□ 1.51
COL1A1P02452 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
COL1A1P02452 REXO1L12P-201ENST00000622156 912 ntBASIC24.49■■□□□ 1.51
COL1A1P02452 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC24.49■■□□□ 1.51
COL1A1P02452 AL023875.1-201ENST00000640777 796 ntBASIC24.49■■□□□ 1.51
COL1A1P02452 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC24.49■■□□□ 1.51
COL1A1P02452 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
COL1A1P02452 ERF-202ENST00000440177 2032 ntTSL 2 BASIC24.49■■□□□ 1.51
COL1A1P02452 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
COL1A1P02452 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
COL1A1P02452 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
COL1A1P02452 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
COL1A1P02452 AC079834.2-201ENST00000609776 1949 ntBASIC24.48■■□□□ 1.51
COL1A1P02452 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC24.48■■□□□ 1.51
COL1A1P02452 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
COL1A1P02452 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC24.48■■□□□ 1.51
COL1A1P02452 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC24.48■■□□□ 1.51
COL1A1P02452 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC24.48■■□□□ 1.51
COL1A1P02452 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
COL1A1P02452 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC24.48■■□□□ 1.51
COL1A1P02452 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
COL1A1P02452 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
COL1A1P02452 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
COL1A1P02452 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC24.48■■□□□ 1.51
COL1A1P02452 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
COL1A1P02452 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
COL1A1P02452 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
COL1A1P02452 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
COL1A1P02452 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
COL1A1P02452 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC24.47■■□□□ 1.51
COL1A1P02452 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC24.47■■□□□ 1.51
COL1A1P02452 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC24.47■■□□□ 1.51
COL1A1P02452 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC24.47■■□□□ 1.51
COL1A1P02452 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC24.47■■□□□ 1.51
COL1A1P02452 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC24.47■■□□□ 1.51
COL1A1P02452 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
COL1A1P02452 AL049637.2-201ENST00000641778 930 ntBASIC24.47■■□□□ 1.51
COL1A1P02452 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC24.47■■□□□ 1.51
COL1A1P02452 AL135905.2-201ENST00000584934 1404 ntBASIC24.47■■□□□ 1.51
COL1A1P02452 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
COL1A1P02452 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
COL1A1P02452 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
COL1A1P02452 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
COL1A1P02452 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
COL1A1P02452 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
COL1A1P02452 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
COL1A1P02452 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC24.46■■□□□ 1.51
COL1A1P02452 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
COL1A1P02452 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
COL1A1P02452 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC24.46■■□□□ 1.51
COL1A1P02452 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
COL1A1P02452 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
COL1A1P02452 KRT17P2-201ENST00000300992 1314 ntBASIC24.46■■□□□ 1.51
COL1A1P02452 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
COL1A1P02452 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
COL1A1P02452 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
COL1A1P02452 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC24.46■■□□□ 1.51
COL1A1P02452 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
COL1A1P02452 AC023632.3-201ENST00000521633 145 ntBASIC24.46■■□□□ 1.51
COL1A1P02452 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC24.46■■□□□ 1.51
COL1A1P02452 AC010331.1-201ENST00000611423 582 ntBASIC24.46■■□□□ 1.51
COL1A1P02452 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
COL1A1P02452 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
COL1A1P02452 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
COL1A1P02452 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms