Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC21.71■■□□□ 1.07
RNF40O75150 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF40O75150 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.71■■□□□ 1.07
RNF40O75150 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
RNF40O75150 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.71■■□□□ 1.07
RNF40O75150 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF40O75150 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RNF40O75150 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.71■■□□□ 1.07
RNF40O75150 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF40O75150 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.71■■□□□ 1.07
RNF40O75150 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC21.71■■□□□ 1.07
RNF40O75150 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.71■■□□□ 1.07
RNF40O75150 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
RNF40O75150 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.71■■□□□ 1.07
RNF40O75150 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF40O75150 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF40O75150 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
RNF40O75150 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RNF40O75150 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.71■■□□□ 1.07
RNF40O75150 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF40O75150 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
RNF40O75150 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RNF40O75150 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RNF40O75150 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.71■■□□□ 1.07
RNF40O75150 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
RNF40O75150 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF40O75150 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF40O75150 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF40O75150 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF40O75150 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF40O75150 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF40O75150 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
RNF40O75150 TERF1P5-201ENST00000477545 1207 ntBASIC21.7■■□□□ 1.06
RNF40O75150 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.7■■□□□ 1.06
RNF40O75150 AL034346.1-201ENST00000568244 1277 ntBASIC21.7■■□□□ 1.06
RNF40O75150 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
RNF40O75150 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
RNF40O75150 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RNF40O75150 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF40O75150 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF40O75150 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF40O75150 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC21.7■■□□□ 1.06
RNF40O75150 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RNF40O75150 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.7■■□□□ 1.06
RNF40O75150 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.7■■□□□ 1.06
RNF40O75150 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.69■■□□□ 1.06
RNF40O75150 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF40O75150 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF40O75150 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF40O75150 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF40O75150 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC21.69■■□□□ 1.06
RNF40O75150 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF40O75150 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF40O75150 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC21.69■■□□□ 1.06
RNF40O75150 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RNF40O75150 CYP2T1P-201ENST00000432607 1285 ntBASIC21.69■■□□□ 1.06
RNF40O75150 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
RNF40O75150 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
RNF40O75150 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RNF40O75150 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.69■■□□□ 1.06
RNF40O75150 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.69■■□□□ 1.06
RNF40O75150 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
RNF40O75150 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF40O75150 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF40O75150 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.69■■□□□ 1.06
RNF40O75150 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF40O75150 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.69■■□□□ 1.06
RNF40O75150 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF40O75150 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF40O75150 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF40O75150 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF40O75150 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
RNF40O75150 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF40O75150 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
RNF40O75150 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF40O75150 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF40O75150 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
RNF40O75150 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.68■■□□□ 1.06
RNF40O75150 EEF1DP3-203ENST00000566025 782 ntBASIC21.68■■□□□ 1.06
RNF40O75150 SLC7A5P1-201ENST00000568957 537 ntBASIC21.68■■□□□ 1.06
RNF40O75150 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF40O75150 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.68■■□□□ 1.06
RNF40O75150 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.68■■□□□ 1.06
RNF40O75150 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF40O75150 AC068338.2-201ENST00000563278 1430 ntBASIC21.68■■□□□ 1.06
RNF40O75150 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF40O75150 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF40O75150 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC21.68■■□□□ 1.06
RNF40O75150 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
RNF40O75150 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
RNF40O75150 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF40O75150 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
RNF40O75150 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF40O75150 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF40O75150 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
RNF40O75150 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
RNF40O75150 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF40O75150 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RNF40O75150 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.67■■□□□ 1.06
RNF40O75150 AP006587.3-201ENST00000525742 1516 ntBASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms