Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
SGCEO43556 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.83■□□□□ 0.44
SGCEO43556 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.83■□□□□ 0.44
SGCEO43556 AC016405.3-201ENST00000607710 860 ntBASIC17.83■□□□□ 0.44
SGCEO43556 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SGCEO43556 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SGCEO43556 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SGCEO43556 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
SGCEO43556 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.83■□□□□ 0.44
SGCEO43556 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SGCEO43556 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.83■□□□□ 0.44
SGCEO43556 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
SGCEO43556 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
SGCEO43556 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SGCEO43556 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SGCEO43556 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SGCEO43556 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SGCEO43556 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SGCEO43556 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SGCEO43556 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
SGCEO43556 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SGCEO43556 AC068338.2-201ENST00000563278 1430 ntBASIC17.82■□□□□ 0.44
SGCEO43556 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.82■□□□□ 0.44
SGCEO43556 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SGCEO43556 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.82■□□□□ 0.44
SGCEO43556 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.82■□□□□ 0.44
SGCEO43556 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SGCEO43556 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
SGCEO43556 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SGCEO43556 METTL26-203ENST00000397664 604 ntTSL 2 BASIC17.82■□□□□ 0.44
SGCEO43556 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.82■□□□□ 0.44
SGCEO43556 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.82■□□□□ 0.44
SGCEO43556 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.82■□□□□ 0.44
SGCEO43556 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SGCEO43556 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SGCEO43556 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
SGCEO43556 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SGCEO43556 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SGCEO43556 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
SGCEO43556 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SGCEO43556 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
SGCEO43556 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SGCEO43556 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SGCEO43556 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SGCEO43556 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SGCEO43556 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SGCEO43556 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.81■□□□□ 0.44
SGCEO43556 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SGCEO43556 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SGCEO43556 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SGCEO43556 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.81■□□□□ 0.44
SGCEO43556 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.81■□□□□ 0.44
SGCEO43556 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SGCEO43556 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SGCEO43556 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.81■□□□□ 0.44
SGCEO43556 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SGCEO43556 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC17.81■□□□□ 0.44
SGCEO43556 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.81■□□□□ 0.44
SGCEO43556 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
SGCEO43556 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC17.81■□□□□ 0.44
SGCEO43556 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SGCEO43556 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SGCEO43556 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SGCEO43556 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SGCEO43556 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SGCEO43556 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
SGCEO43556 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
SGCEO43556 KRT8P36-201ENST00000489121 1440 ntBASIC17.81■□□□□ 0.44
SGCEO43556 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.8■□□□□ 0.44
SGCEO43556 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.8■□□□□ 0.44
SGCEO43556 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.8■□□□□ 0.44
SGCEO43556 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SGCEO43556 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.8■□□□□ 0.44
SGCEO43556 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
SGCEO43556 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SGCEO43556 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.8■□□□□ 0.44
SGCEO43556 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC17.8■□□□□ 0.44
SGCEO43556 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SGCEO43556 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SGCEO43556 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.8■□□□□ 0.44
SGCEO43556 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
SGCEO43556 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
SGCEO43556 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SGCEO43556 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.8■□□□□ 0.44
SGCEO43556 RARRES2P4-201ENST00000514074 484 ntBASIC17.8■□□□□ 0.44
SGCEO43556 AC069236.1-201ENST00000604339 616 ntBASIC17.8■□□□□ 0.44
SGCEO43556 AL137784.2-201ENST00000607332 1000 ntBASIC17.8■□□□□ 0.44
SGCEO43556 IKBKGP1-201ENST00000612193 1073 ntBASIC17.8■□□□□ 0.44
SGCEO43556 AC092437.1-201ENST00000624794 1048 ntBASIC17.8■□□□□ 0.44
SGCEO43556 PARP1-210ENST00000629232 477 ntTSL 5 BASIC17.8■□□□□ 0.44
SGCEO43556 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.8■□□□□ 0.44
SGCEO43556 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SGCEO43556 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.8■□□□□ 0.44
SGCEO43556 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SGCEO43556 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SGCEO43556 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.8■□□□□ 0.44
SGCEO43556 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SGCEO43556 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.8■□□□□ 0.44
SGCEO43556 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.79■□□□□ 0.44
SGCEO43556 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms