Protein–RNA interactions for Protein: O43405

COCH, Cochlin, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COCHO43405 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
COCHO43405 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
COCHO43405 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COCHO43405 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
COCHO43405 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
COCHO43405 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.97■□□□□ 0.95
COCHO43405 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COCHO43405 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.97■□□□□ 0.95
COCHO43405 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COCHO43405 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.97■□□□□ 0.95
COCHO43405 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.97■□□□□ 0.95
COCHO43405 MTDHP1-201ENST00000605323 784 ntBASIC20.97■□□□□ 0.95
COCHO43405 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.97■□□□□ 0.95
COCHO43405 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
COCHO43405 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
COCHO43405 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.97■□□□□ 0.95
COCHO43405 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COCHO43405 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COCHO43405 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
COCHO43405 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.96■□□□□ 0.95
COCHO43405 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.96■□□□□ 0.95
COCHO43405 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
COCHO43405 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
COCHO43405 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
COCHO43405 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
COCHO43405 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COCHO43405 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.96■□□□□ 0.95
COCHO43405 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.96■□□□□ 0.95
COCHO43405 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.96■□□□□ 0.95
COCHO43405 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
COCHO43405 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.96■□□□□ 0.95
COCHO43405 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.96■□□□□ 0.95
COCHO43405 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COCHO43405 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COCHO43405 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.96■□□□□ 0.95
COCHO43405 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
COCHO43405 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
COCHO43405 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
COCHO43405 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
COCHO43405 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
COCHO43405 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.95■□□□□ 0.94
COCHO43405 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.95■□□□□ 0.94
COCHO43405 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.95■□□□□ 0.94
COCHO43405 FAM197Y4-202ENST00000622692 608 ntBASIC20.95■□□□□ 0.94
COCHO43405 PTBP1P-201ENST00000554374 1601 ntBASIC20.95■□□□□ 0.94
COCHO43405 AC007375.3-201ENST00000600936 2314 ntBASIC20.95■□□□□ 0.94
COCHO43405 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
COCHO43405 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
COCHO43405 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
COCHO43405 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COCHO43405 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.95■□□□□ 0.94
COCHO43405 AC007225.1-201ENST00000566331 1836 ntBASIC20.94■□□□□ 0.94
COCHO43405 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COCHO43405 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COCHO43405 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
COCHO43405 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
COCHO43405 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COCHO43405 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
COCHO43405 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.94■□□□□ 0.94
COCHO43405 UBE2SP1-201ENST00000450587 669 ntBASIC20.94■□□□□ 0.94
COCHO43405 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COCHO43405 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.94■□□□□ 0.94
COCHO43405 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.94■□□□□ 0.94
COCHO43405 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.94■□□□□ 0.94
COCHO43405 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.94■□□□□ 0.94
COCHO43405 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
COCHO43405 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.94■□□□□ 0.94
COCHO43405 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.94■□□□□ 0.94
COCHO43405 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COCHO43405 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COCHO43405 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
COCHO43405 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
COCHO43405 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
COCHO43405 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COCHO43405 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
COCHO43405 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COCHO43405 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.93■□□□□ 0.94
COCHO43405 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COCHO43405 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COCHO43405 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.93■□□□□ 0.94
COCHO43405 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
COCHO43405 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
COCHO43405 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.93■□□□□ 0.94
COCHO43405 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.93■□□□□ 0.94
COCHO43405 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COCHO43405 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
COCHO43405 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
COCHO43405 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.93■□□□□ 0.94
COCHO43405 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
COCHO43405 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COCHO43405 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.92■□□□□ 0.94
COCHO43405 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
COCHO43405 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COCHO43405 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COCHO43405 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COCHO43405 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
COCHO43405 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
COCHO43405 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.92■□□□□ 0.94
COCHO43405 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.92■□□□□ 0.94
COCHO43405 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms