Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TLR4O00206 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TLR4O00206 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TLR4O00206 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
TLR4O00206 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TLR4O00206 SNORA78-201ENST00000459373 127 ntBASIC20.06■□□□□ 0.8
TLR4O00206 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.06■□□□□ 0.8
TLR4O00206 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TLR4O00206 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TLR4O00206 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
TLR4O00206 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.06■□□□□ 0.8
TLR4O00206 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TLR4O00206 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.05■□□□□ 0.8
TLR4O00206 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
TLR4O00206 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TLR4O00206 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.05■□□□□ 0.8
TLR4O00206 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
TLR4O00206 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TLR4O00206 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
TLR4O00206 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
TLR4O00206 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
TLR4O00206 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TLR4O00206 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.05■□□□□ 0.8
TLR4O00206 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.05■□□□□ 0.8
TLR4O00206 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.05■□□□□ 0.8
TLR4O00206 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
TLR4O00206 AC133681.1-201ENST00000465482 601 ntBASIC20.05■□□□□ 0.8
TLR4O00206 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TLR4O00206 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.05■□□□□ 0.8
TLR4O00206 AC124016.1-201ENST00000609552 612 ntBASIC20.05■□□□□ 0.8
TLR4O00206 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TLR4O00206 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
TLR4O00206 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
TLR4O00206 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.05■□□□□ 0.8
TLR4O00206 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
TLR4O00206 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.05■□□□□ 0.8
TLR4O00206 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TLR4O00206 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TLR4O00206 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TLR4O00206 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TLR4O00206 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TLR4O00206 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TLR4O00206 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.04■□□□□ 0.8
TLR4O00206 AC239809.2-201ENST00000415381 517 ntBASIC20.04■□□□□ 0.8
TLR4O00206 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
TLR4O00206 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.04■□□□□ 0.8
TLR4O00206 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.04■□□□□ 0.8
TLR4O00206 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.04■□□□□ 0.8
TLR4O00206 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.04■□□□□ 0.8
TLR4O00206 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TLR4O00206 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.04■□□□□ 0.8
TLR4O00206 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.04■□□□□ 0.8
TLR4O00206 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
TLR4O00206 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TLR4O00206 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TLR4O00206 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TLR4O00206 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.03■□□□□ 0.8
TLR4O00206 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TLR4O00206 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.03■□□□□ 0.8
TLR4O00206 AC011484.1-201ENST00000377652 1995 ntBASIC20.03■□□□□ 0.8
TLR4O00206 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TLR4O00206 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TLR4O00206 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TLR4O00206 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TLR4O00206 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TLR4O00206 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TLR4O00206 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TLR4O00206 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20.03■□□□□ 0.8
TLR4O00206 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.03■□□□□ 0.8
TLR4O00206 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
TLR4O00206 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TLR4O00206 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.03■□□□□ 0.8
TLR4O00206 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TLR4O00206 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.03■□□□□ 0.8
TLR4O00206 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.03■□□□□ 0.8
TLR4O00206 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TLR4O00206 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TLR4O00206 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
TLR4O00206 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TLR4O00206 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
TLR4O00206 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TLR4O00206 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.02■□□□□ 0.8
TLR4O00206 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
TLR4O00206 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.02■□□□□ 0.8
TLR4O00206 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TLR4O00206 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
TLR4O00206 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
TLR4O00206 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
TLR4O00206 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TLR4O00206 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TLR4O00206 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.02■□□□□ 0.8
TLR4O00206 RPS2P55-201ENST00000397318 883 ntBASIC20.02■□□□□ 0.8
TLR4O00206 AC012618.2-201ENST00000428058 849 ntBASIC20.02■□□□□ 0.8
TLR4O00206 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.02■□□□□ 0.8
TLR4O00206 AC107956.1-201ENST00000494359 873 ntBASIC20.02■□□□□ 0.8
TLR4O00206 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.02■□□□□ 0.8
TLR4O00206 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.02■□□□□ 0.8
TLR4O00206 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.02■□□□□ 0.8
TLR4O00206 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.02■□□□□ 0.8
TLR4O00206 AC233702.5-201ENST00000584107 538 ntBASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms